Neisseria dumasiana: LVJ88_01570
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Entry
LVJ88_01570 CDS
T08094
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ndu
Neisseria dumasiana
Pathway
ndu03030
DNA replication
ndu03430
Mismatch repair
ndu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ88_01570 (dnaE)
03430 Mismatch repair
LVJ88_01570 (dnaE)
03440 Homologous recombination
LVJ88_01570 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndu03032
]
LVJ88_01570 (dnaE)
03400 DNA repair and recombination proteins [BR:
ndu03400
]
LVJ88_01570 (dnaE)
Enzymes [BR:
ndu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ88_01570 (dnaE)
DNA replication proteins [BR:
ndu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ88_01570 (dnaE)
DNA repair and recombination proteins [BR:
ndu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ88_01570 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
UOO85544
LinkDB
All DBs
Position
complement(356133..359567)
Genome browser
AA seq
1144 aa
AA seq
DB search
MTSPIYIPLRLHTEFSITDGTVRIKDAVKKAVSDGLPALGVSDLMNMFGLVKFYKACRGA
GIKPVASADVWIENPAAPDKPFRAMLIVKNDSGYLRLSELLTAAYVGKDRNVDHAELRQA
WLAEGDNSGLICLSGAHYGEVGANLMNGHADAAKAAAQKYAAWFPNAFYLELQRLPERPQ
WEASVSGSLEIAAALDLPVVATHPTQFLNREDFQAHEARVCIAGGWVLADKKRPQEFTPS
QFFVSPDVMAERFADLPEALQNTVEIAKRCNLTLTLGKNFLPLFPTPDGMSLDDYLTQLS
NEGLQERMVQLYPDEAERAEKMPEYQARLDFELGIIIQMGFPGYFLIVQDFINWAKNNGC
PVGPGRGSGAGSLVAYALKITDLDPLKYALLFERFLNPERVSMPDFDIDFCQSNRGRVIE
YVREKYGADAVSQIVTFGTMSSKAVIRDVGRVLELPFGLCDRLSKLIPLEANRPVSLDKA
MEMEPEIRQLIEEEGAEELMTLAQKLEDLTRGLGMHAGGVLIAPGKISDFSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQENIKNTVGEEIDVNTIPLDDQAAYKI
FRDANTTAVFQFESTGMKKMLKTANTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQDFE
YIHPLLEPVLEPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AKGAEEKNISRKKADEIFDYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDARANGIEFLPPDINESDYLFTPNNRKQIRYALGAIKGTGEGAVA
SIMEARKQGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN
NADQKAANANQGGLFDMMEDAIAAIELQAAPAWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTRLSRLKPQDNVRVAGFTTAVRTMMGKRGKIAFATLEDQSGQVEVMITGNVLE
ESAGRLKADQVLIMECKVSRDDYTGGDTLRIVANQVMTLQTARERYARSLSLSLKPEHDI
PALAQLLNTHRRPDTGHIPISLSYANAAACGDLKIPPKWTVTPSAELFDKLETLLGGRSV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccccatctacatccccctgcgcctgcacaccgaattttcgattaccgacggc
acggtacgcatcaaagatgccgtgaaaaaagccgtttcagacggcctgcccgcgctgggc
gtgagcgatttgatgaacatgttcggcttggtgaaattctataaagcctgccgcggcgca
ggcatcaagccggtggcttcggcggacgtgtggattgaaaaccccgctgcgcccgacaaa
cctttccgcgccatgttgattgtaaaaaacgacagcggctacctgcgcctgagcgaactg
cttaccgccgcctatgtgggcaaagaccgcaacgtcgatcatgccgagctgcggcaggca
tggctggccgagggcgacaacagcggccttatctgcttatcgggcgcacactacggcgaa
gtgggcgcaaacctgatgaacggccatgccgatgcggccaaagcggcggcgcaaaaatac
gcggcgtggtttcccaatgccttttacctcgaactgcaacgcctgcccgaacgcccgcaa
tgggaggcttccgtatccggcagcttggaaatcgcggcggcattggatctgccggtagtc
gccacccatccgacccagtttctcaaccgtgaagatttccaagcccacgaagcgcgggtg
tgcattgccggcggctgggtgctggcagataaaaaacgcccgcaagaatttacgccgagc
cagtttttcgtatcgcccgacgtgatggccgagcggttcgccgacctgcccgaagccctg
caaaacacggtggaaatcgccaaacgctgcaacctcacgctcacgctgggcaaaaacttt
ttgccgctgttccccacgcccgacggcatgtcgctcgacgattatctgacccaactttcc
aacgaaggtttgcaagagcgcatggtgcagctttaccccgacgaagcggaacgcgccgaa
aaaatgcccgaatatcaagcgcgcttggattttgaattgggcatcatcatccaaatgggc
tttccgggctacttcctcatcgtacaagacttcatcaactgggcgaaaaacaacggctgc
ccggtggggccggggcgcggttcgggtgcaggctcgctggtggcctacgcgctgaaaatc
accgacctcgacccgctgaaatacgcactgctattcgagcggttcttaaaccccgagcgc
gtttccatgcccgacttcgatatcgacttctgccaaagcaaccgcggccgcgtgattgaa
tatgtgcgcgaaaaatacggtgccgatgccgtgagccagattgttaccttcggcaccatg
tcgtccaaagccgttatccgcgacgtgggccgcgtgctggaactgccgttcggcctgtgc
gaccgcttgtcgaaactgattccgctcgaagccaaccgcccagtgagcttggacaaagcg
atggaaatggagccggaaatccgccagctgatcgaagaagaaggcgcggaagagttgatg
acgctggcgcaaaagctggaagacctcacgcgcggcttgggcatgcacgcaggcggcgtg
ttgattgcgccgggcaaaatttccgacttcagccccgtgtatcaggccgacgaatccgcc
tcgcccgtgtcgatgtacgacaaaggcgacgtggaagacgtgggcttggtgaaattcgac
ttcttgggcttgcgcaacctcaccattatcgaaatggcgcaggaaaacattaaaaacacc
gtcggcgaagaaatcgacgtaaacaccattccgctcgacgaccaagccgcctacaaaatt
ttccgcgatgccaacaccaccgccgttttccagtttgaatcgaccggcatgaaaaaaatg
ctgaaaacggcgaacaccaccaaatttgaagagttgatcgccttcgtatcgctctaccgc
cccggcccgatggacaacattcccgatttcgtcgcccgcatgaaagggcaggatttcgaa
tacatccacccgctgctcgaaccggtgttggagccgacttacggcatcatggtttaccaa
gagcaggtgatgcaggccgcgcaggtgatcggcggctactcgctcggcggtgcggacttg
ctgcgccgcgccatgggtaagaaaaaacccgaagaaatggtgaaacaccgcgaaatcttc
gccaaaggcgcggaagaaaaaaatatttcccgcaaaaaagccgacgaaattttcgactac
atggaaaaattcgccggctacggcttcaacaaatcgcacgccgccgcctacgcgctgatt
tcctaccaaaccgcatggctgaaagcgcattatcccgccgaattcatggccgccaccatg
tcgagcgagttggacaacaccgaccagctcaaacacttctacgacgacgcacgcgccaac
ggcatcgaatttctgccgcccgacatcaacgaatcggattacctgtttacccccaacaac
cgcaaacaaatccgctatgccctcggtgccatcaaaggcaccggcgaaggcgcggtagcc
tccatcatggaagcacgcaaacagggcggcaaattcaccgggctgctcgatttctgcgaa
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgagcccaaccgcgccatgttgctcgccaacatcgacctggccatgaac
aacgccgaccaaaaagccgccaacgccaatcagggcgggctattcgacatgatggaagat
gccatcgccgccatcgagctgcaagccgcacccgcatggagcgaatcggaaaagctcgcc
gaagaaaaaaccgttatcggcttctacctatccggccaccccttcggcccctacgcccaa
gaagtgcgccaaatcgcccccacccgcctgagccgtctgaaaccgcaagacaacgtgcgc
gtggccggcttcaccaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gccaccctcgaagaccaaagcgggcaagtggaagtgatgattaccggcaacgtgctcgaa
gaaagcgcaggccgtctgaaagccgaccaagtgctgattatggaatgcaaagtcagccgc
gacgactacaccggcggcgacaccttgcgcatcgttgccaaccaagtgatgacgctgcaa
accgcccgcgaacgctacgcccgcagcctgagcctgagcctgaaacccgaacacgacatc
cccgctttggcacagctgctgaacacccaccgccgccccgataccggccatatccccatc
agcctttcctacgccaacgccgctgcctgcggcgatttgaagattccgcccaaatggacg
gtaacgccgagcgcggaactcttcgacaagctggaaaccctgttgggcggacgctccgtg
cgggtaaattggtag
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