Neisseria dumasiana: LVJ88_03765
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Entry
LVJ88_03765 CDS
T08094
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ndu
Neisseria dumasiana
Pathway
ndu00260
Glycine, serine and threonine metabolism
ndu00460
Cyanoamino acid metabolism
ndu00630
Glyoxylate and dicarboxylate metabolism
ndu00670
One carbon pool by folate
ndu00680
Methane metabolism
ndu01100
Metabolic pathways
ndu01110
Biosynthesis of secondary metabolites
ndu01120
Microbial metabolism in diverse environments
ndu01200
Carbon metabolism
ndu01230
Biosynthesis of amino acids
ndu01240
Biosynthesis of cofactors
ndu04981
Folate transport and metabolism
Module
ndu_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ndu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LVJ88_03765
09102 Energy metabolism
00680 Methane metabolism
LVJ88_03765
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LVJ88_03765
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LVJ88_03765
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LVJ88_03765
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LVJ88_03765
Enzymes [BR:
ndu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LVJ88_03765
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
UOO85114
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Position
827642..828892
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AA seq
416 aa
AA seq
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MFSKSVTIEQYDPELAAAMAKEVQRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP
AKRYYGGCEYVDIAEQLAIDRVKKLFGAEYANVQPHSGSQANQAVYASVLKPGDTILGMS
LAHGGHLTHGASVNISGKLYNAITYGLDENEVLDYAEVERLALEHKPKMIVAGASAYALQ
IDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVPYADFVTTTTHKTLRGPRGGVIL
CRDNTHEKALNSAIFPSLQGGPLMHVIAAKAVAFKEALEPEFKAYAKQVKINAAAMAEEL
VKRGLRIISGRTESHVFLVDLRSKNITGKAAEEALGKAHITINKNAIPNDPEKPFVTSGI
RVGTAAITTRGFSEADARELANLVADVLENPEDQATLERVAKAATALCEKNPVYGA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaaagcgtaaccattgagcaatacgatcccgaacttgccgccgcgatggcc
aaagaagtgcaacgccagcaagatcacgttgagctgattgcttcggaaaactacgtcagc
tgcgccgtgatggaagcgcaaggcagccagctaaccaacaaatacgccgaaggctacccc
gccaaacgctattacggcggctgcgaatatgtagatatcgccgagcaactggccatcgac
cgcgtgaaaaaacttttcggcgccgaatacgccaacgtgcagccgcattccggctcgcaa
gccaaccaagccgtgtacgcttcggtgctgaaacccggcgacaccattctcggcatgagc
ttggcacacggcggccacttaacccacggcgcatcggttaatatttccggcaaactgtat
aacgccatcacttacggtttggacgaaaacgaagtgctggattacgccgaagtagaacgc
ttggctttggaacacaaaccgaaaatgattgtggccggtgcttccgcctatgccctgcaa
atcgactgggccaagttccgcgaaatcgccgacaaagtgggcgcatacttatttgtggat
atggcgcactacgcaggcttggtggccggcggcgaatatcccaaccccgtgccttatgcc
gacttcgttaccaccaccacccataaaaccctgcgcggcccgcgtggcggcgtgattctg
tgccgcgacaacacgcacgaaaaagccctcaattccgccattttcccgagcctgcaaggt
ggcccgctgatgcatgtgattgccgccaaagccgtggcctttaaagaagcgttggagccg
gagttcaaagcatacgccaaacaagtgaaaatcaatgccgcggctatggcggaagagttg
gtgaaacgcggtttgcgcatcatttcaggtcgcaccgaaagccacgttttcttggtggat
ttgcgttccaaaaacattaccggcaaagccgccgaagaagccttgggcaaagcgcacatc
accatcaataaaaacgccattccgaacgaccccgaaaaaccgtttgttacttccggcatt
cgcgtcggcaccgcagcgattaccacccgcggtttcagcgaagccgatgcccgcgagttg
gccaatttggttgcagatgtgctggaaaaccccgaagaccaagccacgctggagcgtgta
gccaaagctgctaccgctttgtgtgagaaaaatccggtttacggtgcctaa
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