Neisseria dumasiana: LVJ88_05605
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Entry
LVJ88_05605 CDS
T08094
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ndu
Neisseria dumasiana
Brite
KEGG Orthology (KO) [BR:
ndu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndu03016
]
LVJ88_05605 (truB)
Enzymes [BR:
ndu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LVJ88_05605 (truB)
Transfer RNA biogenesis [BR:
ndu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LVJ88_05605 (truB)
Prokaryotic type
LVJ88_05605 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UOO85445
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All DBs
Position
1233398..1234318
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AA seq
306 aa
AA seq
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MNPFSKPQKRAVNGVLLLDKPQGLSSNTALQKARRLYRAEKAGHTGVLDPIATGLLPVCF
GEATKFAQYLLDADKAYTATLKLGEATSTGDAEGEVVATGRADIPYEDFQTACRALTGSI
RQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITIYSIDIQSFSPPEAVIDVRCSKGTY
IRTLSEDIAKHIGTFAHLTALRRTETAGFSIGQTHTLEKLEGLDEAARDGLLLPCDVLVE
HLPRLVLPEPSVRLLKFGQQPAHSGNSVSSDMPIRIYDENGTFIGLVEYQIETGRLKALR
LMNTAT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgttttccaaaccgcaaaaacgcgccgtgaacggcgtacttctgctcgacaaa
ccacaaggattgtcgagcaataccgccttgcagaaagcccgccgtctctaccgcgccgaa
aaagccggccataccggcgtgctcgacccgatcgccaccggcctgcttcccgtatgtttc
ggcgaagccaccaaattcgcacaatatctgttggatgccgacaaagcctacacagccaca
ctcaaactcggcgaagcgacttcaaccggcgatgccgaaggcgaggttgttgccacgggc
cgtgccgatattccatacgaagattttcagacggcctgtcgggcattgaccggctctatc
cgacaagtgccgccgatgttttcggcattgaagcatgagggcaaaccgctttatgaatac
gcccgcaaaggcatagtcatcgagcgcaagccgcgcgacattaccatttattccatcgat
atccaatcctttagcccgcccgaagccgtaattgatgtgcgttgcagcaaaggcacttac
attcgcacactgagtgaggacatcgccaaacatatcggcactttcgcccatctgaccgcg
ctgcgccgcaccgaaaccgccggtttttcgatagggcaaacgcatacgctcgaaaaattg
gaagggttggacgaagccgcacgcgacggtttgctgctgccttgcgatgtgctggtcgaa
cacctcccccgtcttgttttgcccgaaccgtctgttcggttgctcaagttcggtcagcag
ccggcgcattccggcaacagtgtttcttccgatatgccgattcggatttatgacgaaaac
ggcacttttatcggcttggtcgagtatcagattgaaacaggccgtctgaaagcgctgcgg
ttgatgaatacggcaacataa
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