Neisseria dumasiana: LVJ88_11115
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Entry
LVJ88_11115 CDS
T08094
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ndu
Neisseria dumasiana
Pathway
ndu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ndu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LVJ88_11115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ndu02022
]
LVJ88_11115
02035 Bacterial motility proteins [BR:
ndu02035
]
LVJ88_11115
Two-component system [BR:
ndu02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LVJ88_11115
Bacterial motility proteins [BR:
ndu02035
]
Pilus system
Twitching motility proteins
LVJ88_11115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_19
HTH_50
AAA_5
HTH_28
AAA_16
HTH_30
SHOCT
Motif
Other DBs
NCBI-ProteinID:
UOO84204
LinkDB
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Position
complement(2390132..2391817)
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AA seq
561 aa
AA seq
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MSNHNLQDPVLVVDDEADIRDLMEMTLMKMGLRVQTAVGVEDAKDKLDNNDYSLVLTDMR
MPDGSGLEVVQYINELALDTPVAVITAFGNADQAVEALRAGAFDYLQKPITLSQLRSLVK
SAVKVSEPTEGLRAAVQPEPPRSEPVARPAPTPPAAAKPMPMPARTAPMPFTAYTPPRKN
TGSALTRSAGVPEGLRSLKERFASGELTARILPDSGKELGGESDMPRLLGMSPQMIEVRH
LIRRLAKSGVPVYIAGESGTGKEQAARTIHELSDRADKPFIAVNCGAIPENLMESEFFGY
KKGSFTGADSDRLGFFQHADGGTLFLDEVADLPLPMQVKLLRAIQEKAVRRIGDARETYV
DVRIICATHKNLEHLVEVGAFRQDLYYRLNVVSLSMPPLREMREDLGGLIMHLLHKHRSG
SENYKLSPKAQDALLQYSYPGNFRELENILERAVALTVGQVIQLDDLQIHTGTTPQFQAG
KLEHQHLHSPAEEISDGLQLSGGLPDFVPGKMQIQDYLDQIEREIIEQALKQTRYNRTQA
AKLLGISFRSMRYRMERLDIH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccataacctgcaagatcccgtattggtggtggatgacgaagccgatatccgc
gacctgatggaaatgaccctgatgaaaatgggtttgcgcgttcagacggccgtgggcgta
gaagatgccaaagacaagctcgacaacaacgattattcgctcgtgttaaccgatatgcgt
atgcccgacggctcgggtttggaagtggttcaatacatcaacgagctggcattggacacc
cccgtggccgtgattacggctttcggcaatgccgatcaggcagtggaagccttgcgggca
ggtgcgtttgattacctgcaaaagccgattaccctctcgcaactgcgctctttggttaaa
tcggcggttaaagtcagcgagccgacggaaggtttacgcgctgccgtgcagccggagccg
ccccgttccgaacccgttgcccgccccgctccgacaccgcccgcagcggccaaacctatg
ccgatgcccgcgagaacggctccgatgccttttaccgcttatacgccgccgcgcaaaaat
accggttcggcccttacccgttcggcgggcgtgccggaaggattgcgttctttgaaagag
cgttttgccagcggagaattaactgcccgcattctgcccgattcaggcaaagagttgggc
ggcgaatccgatatgccgcgcttgctcggcatgtcgccgcaaatgattgaagtgcgccac
cttatccgccgcttggccaaaagcggcgtgcccgtttatatcgcgggcgagtcgggcacg
ggtaaagagcaggccgcccgcacgatacacgaattgtccgaccgtgccgacaagcctttt
attgccgtcaactgcggcgcgattcccgaaaacctgatggaaagcgaatttttcggttat
aaaaaaggcagctttaccggtgccgacagcgaccgcttgggtttcttccagcatgccgac
ggcggcacgctgtttctcgacgaagtggccgatctgccgctgcccatgcaggtgaaactg
ctgcgcgcgattcaggaaaaagccgtgcgccgcatcggtgatgcgcgggaaacttatgtc
gatgtacgcatcatctgcgcaacgcataaaaacctcgaacatttggtcgaggttggggct
ttccgccaagacttatattaccggctgaatgtggtttcgctcagcatgccgccgttgcgc
gaaatgcgtgaagatttgggcgggctgattatgcatttgctgcacaaacaccgcagcggc
agcgaaaactacaaactcagccccaaagcgcaagacgctttgctgcaatacagctatccg
ggtaacttccgcgaattggaaaatattttggagcgggcggttgccttaaccgtggggcag
gttatccagcttgacgatctgcaaatccataccggcaccacaccgcagtttcaggccgga
aagctcgaacaccagcatctccacagcccggcggaagagatttcagacggcctgcaactg
agcggcggcttgcccgattttgtgcccggcaaaatgcagatacaggattatctcgaccaa
atcgagcgcgaaatcatcgagcaggctttgaagcagacgcgctacaaccgcacgcaggcc
gccaagcttttgggtatcagcttccgttcgatgcgctaccgtatggaacgcttggatatc
cactga
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