KEGG   Neisseria dumasiana: LVJ88_11480
Entry
LVJ88_11480       CDS       T08094                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
ndu  Neisseria dumasiana
Brite
KEGG Orthology (KO) [BR:ndu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ndu02048]
    LVJ88_11480 (cas8c)
Prokaryotic defense system [BR:ndu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    LVJ88_11480 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: UOO84261
LinkDB
Position
complement(2473399..2475189)
AA seq 596 aa
MILTSLARYYRRLAAENDVAGNPKVPPYGFSEEKIGWVLVLDSDGLLVDVVPHFTTEGKK
TQPRLMSVPRPEKRTSGVKPNFLWDKTAYALGVEANKDKATAKEQPFRPSEKTFAAFREL
HLEALKDTQDGGLLALRRFLERWQPEQFAHPPCRPDMLDANVVFRLDGTRGYIHQREAAQ
ALWAGRLKNDEAEQGLCLISGESAPIARLHPAIKGVFGGQSSGGSIISFNKESFTSFGKE
QGANAPVSEVSAFAYTTALNYLLRRENGHCLTIGDASTVFWAEADTPEQAAAAEACFADM
LDPPDDEQENQKIFNILAQVVKGRPLREIDPNLDDQTRFYILGLAPNASRISIRFWLDTT
FGKLAEHLEQHWRDLALEPRAWKTPPSIWRLLVQTAPLGKSENISPVLAGEMTRAVIGGT
PYPMSLLSQLIARIHADGDANGLRVAMIKAVLQRRFRKSLIKEEVPMSLDTESRNTAYLL
GRLFAVLERIQNQALGDLNAGIADRYYGSASAVPFSVFPRLLSGAKHHLSRLRKDKAGMA
VNLDKDLGGIIAGLPETFPRHLSIEEQGRFAIGYYHQKQSYFAKKDSAETQSHEGE
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgattttgacctctcttgcgcgttattaccgccgtttggccgctgaaaacgatgtggcg
ggcaatcctaaagtgccgccttatgggtttagcgaagaaaaaatcggctgggtgctggtg
ttggattcagacggcctgttggtggatgtggtgccgcattttacgactgagggcaaaaag
acgcagccccgcttgatgagtgtaccgcgccctgaaaagcgcacgtcgggcgtgaagccc
aattttttgtgggacaaaaccgcctatgcgctgggcgtggaagccaataaagacaaagcc
acggccaaagagcagccgttcaggccgtctgaaaaaacctttgccgctttccgcgagctg
catttggaagccctgaaagacacgcaagacgggggtttgctggccttgcgccgttttttg
gaacgctggcagcccgaacaatttgcccatccgccatgccggcctgacatgctggacgca
aacgtggtgttcaggctggacggcacgcgcggctatatccatcagcgcgaagcggcacag
gcattgtgggcaggccgtctgaaaaacgatgaagcggagcagggcttgtgtttgattagc
ggcgagtcagcgccgattgcgcggctgcatccggcgattaaaggcgtgttcggcgggcag
agttcgggcggatcgattatctcgttcaataaagaatcgtttacttctttcggtaaagag
cagggtgcgaatgcgccggtttcggaagtatccgcctttgcctataccaccgcactcaat
tacttgctgcgccgtgaaaacggccattgcctgactatcggcgatgccagcactgttttt
tgggcggaggccgatacccccgaacaagccgccgctgccgaagcctgttttgccgatatg
cttgatccgcccgacgacgagcaggaaaaccaaaaaatcttcaatattttggcgcaagtg
gtcaaaggccgcccgcttcgggaaatcgatccgaatctggacgaccaaacccgcttttac
attctgggtttggcgcccaatgcctcgcgcatttccatccgtttttggctggataccacg
tttggcaagctggcggaacatttggagcagcactggcgcgatttggcacttgagccgcgt
gcatggaaaacgccgccgtcgatttggcgtttgctggttcagacggcccctttgggtaaa
agcgaaaacatatcgcccgtgttggccggtgaaatgactcgcgccgtgatcggcggtacg
ccctatcccatgagcttactgtcgcaactgattgcccgtatccatgccgacggtgatgcc
aacggcctgcgcgtggccatgattaaagccgtattgcagcggcgtttcagaaaaagtttg
attaaagaggaggtccccatgagtttggacaccgaaagccgcaacacggcttatttgctc
ggcagattgtttgccgtgctggagcgcattcaaaatcaggcattgggcgatttgaatgcc
ggcattgccgaccgttattacggctccgcttccgccgtaccgttttccgtattcccgcgt
ttattgagcggcgcaaaacaccatctgtcgcgcctgcgtaaagacaaagcaggcatggcc
gtgaacttggataaagatttgggcggcatcattgccgggctacctgaaacttttccgcgc
catttgagcatagaagaacaaggccgcttcgccatcggctattaccaccaaaaacaaagc
tatttcgccaaaaaagattccgcagaaacccaatcacatgaaggagaatga

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