Nitrosotalea devaniterrae: NDEV_0038
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Entry
NDEV_0038 CDS
T04889
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NDEV_0038 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndv03021
]
NDEV_0038 (tfb)
Transcription machinery [BR:
ndv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NDEV_0038 (tfb)
Prokaryotic type
Archaeal type
TFB
NDEV_0038 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Auto_anti-p27
zf-CCHC_5
Lar_restr_allev
HTH_Tnp_ISL3
HTH_3
HEF_HK
Trm112p
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
CUR50803
UniProt:
A0A128A0C4
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All DBs
Position
1:complement(35742..36686)
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AA seq
314 aa
AA seq
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MLIEILIRYYMTRESFGSGGRCPRCGKGPMVTDNTTGEMFCGGCGFVLTERVEESGPEWR
SFSKEEHEDRSRTGTPTSLAMHDMGLATIIGPADKDASGKPLSASMKSTIERLRTWDSRS
QVHEPVDRNFRQAFSELDRLKDKLALSDAVIEKTAYIYRKALDKGLVRGRSIPGLVAAAL
YAACRDTETPRTLTDVANGINIKRKDVARCYRLLLRELDLKMPVVDPIKCVARIASKAGL
SEKTKRRALQILKDAAEIEISAGKDPMGLAAAALYLSCVMNGENKTQKDVAQAAGVTEVT
IRNRYKGLKESLKL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcgaaattcttataagatattatatgactcgtgaatcttttggttctggcgga
cgttgtcctcgttgtggaaaaggtccgatggtaactgataatactacaggagaaatgttt
tgtggaggttgcggttttgtacttactgaacgtgtagaagaatccggcccagaatggaga
tcattttcaaaagaagaacatgaagatcgaagtagaactggaactcctacttcacttgca
atgcatgacatgggacttgcaacaataattggtcctgctgacaaagatgcatcaggaaaa
ccactttctgcatcaatgaagagtacaatagaaagactaagaacttgggatagtagaagt
caggtccatgaaccagtagacagaaactttagacaagctttcagtgaacttgatagatta
aaggacaaacttgcattatctgatgcagtaattgaaaagactgcctatatttacagaaaa
gcacttgacaaaggtcttgttagaggtagatcaatcccaggacttgttgctgctgcacta
tatgcagcatgtagagatactgaaactccaagaacacttaccgatgttgcaaatggaatc
aacataaagcgaaaggatgtagcaagatgttacagattgttgttacgagaacttgacttg
aaaatgcctgttgttgatccaataaaatgtgttgcaagaattgcaagcaaggcaggcttg
agtgaaaagacaaaaagaagagctttgcagattttaaaagatgcagctgaaattgaaatt
tctgctggaaaggatccaatgggacttgcagctgctgcactttacctatcgtgtgttatg
aatggagaaaataaaactcaaaaggatgttgctcaagctgcaggagtaactgaagtcaca
atcagaaatagatacaagggattaaaggaatctctcaagctttaa
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