Nitrosotalea devaniterrae: NDEV_0257
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Entry
NDEV_0257 CDS
T04889
Name
(GenBank) putative helix-hairpin-helix motif protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDEV_0257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndv03400
]
NDEV_0257
Enzymes [BR:
ndv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NDEV_0257
DNA repair and recombination proteins [BR:
ndv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDEV_0257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
SapB_1
Motif
Other DBs
NCBI-ProteinID:
CUR51022
UniProt:
A0A128A107
LinkDB
All DBs
Position
1:complement(244627..245475)
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AA seq
282 aa
AA seq
DB search
MQKIHAIDIETTINSGQVFLWNKIGVQWVGIDGQDLLILNQSPFSVRSSSNGIDNFLRAD
DNLEKILSNITKDKIVKSAVKQSPGLRLIRQDPFQCYISFICSSNSTIQNIKSMLENLCK
KFGTKKEFEGHKLATFPKADTLANATMKDLIDCKLGFRARYVKEAAQAVNSGKIDFEWLK
KTDYRTAIESLKEILGIGNKVADCIALFSLDKMEAFPIDTWTQKILLKYYKKFFDNITEK
PVTEKKYEKLHEEIVEYFGPYAGYSQQFLFKMERDLNKKNWL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatccatgcaatagacatagaaactacaattaacagcgggcaggtttttctc
tggaataaaattggagtacaatgggttggaatagacggccaggatcttctcatattaaac
cagtcacctttcagtgtcagatcatcgtctaatggaatagacaactttcttagggcagat
gacaatttagaaaaaattttatcaaacattacaaaagacaagattgtaaaaagtgcggta
aaacaatcaccaggtttgagattgataagacaggatccgttccagtgctacatatcattt
atctgctcgtcaaattcaaccatacaaaatatcaagtcaatgcttgaaaacttgtgcaaa
aaatttggcaccaagaaagagtttgagggacataaactggctacatttccaaaagcagac
actcttgcaaatgcaaccatgaaagatctgattgattgcaagctaggattcagggcaaga
tatgtcaaggaggccgcccaggcagtaaattctggcaagatcgattttgaatggttgaaa
aaaacagattatcgaactgccatagaatctttgaaagaaattctggggataggtaacaaa
gtggcagattgtattgcactattttctcttgacaaaatggaggcttttccaattgacaca
tggacacaaaaaattttgttaaaatattacaagaaattttttgacaacatcacagagaaa
cctgtgactgaaaaaaaatatgaaaaacttcatgaagagattgtagaatattttggacca
tacgctggttattcacaacaatttctcttcaagatggaaagagatcttaacaaaaaaaat
tggttgtaa
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