Nitrosotalea devaniterrae: NDEV_0330
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Entry
NDEV_0330 CDS
T04889
Symbol
spt
Name
(GenBank) Transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NDEV_0330 (spt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndv03021
]
NDEV_0330 (spt)
03019 Messenger RNA biogenesis [BR:
ndv03019
]
NDEV_0330 (spt)
Transcription machinery [BR:
ndv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NDEV_0330 (spt)
RNA polymerase I system
NDEV_0330 (spt)
Messenger RNA biogenesis [BR:
ndv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NDEV_0330 (spt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW5_SPT5
KOW2_Spt5
KOW4_SPT5
SH3_KIN17_C
Motif
Other DBs
NCBI-ProteinID:
CUR51095
UniProt:
A0A128A165
LinkDB
All DBs
Position
1:complement(311234..311689)
Genome browser
AA seq
151 aa
AA seq
DB search
MAQETKSHFFAVRTTGGQEKVVMGLLENRIKLKKLNIQSVLLLENLKGYVVVEAIDANAA
FDALQGIRHIRGQLRGELTFKDIEGYLVKKSTVSELVVDQVVEIIGGPFKGMKATVTRVD
HDKEEATVILLDAPYQLPVTVDANYLKPSTH
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaaacaaaatcacactttttcgcagtaagaaccaccggaggtcaagaaaag
gttgtcatgggtctcttagaaaatagaattaaactaaaaaaacttaacatacaatcagtt
cttctcctagaaaatctcaagggatatgttgttgtagaggcaatagatgcaaatgcagca
tttgatgcattacaaggaatcagacacataagaggccaactaagaggagagttgacattc
aaagacatagaaggttacctagttaagaaatccacagtttcagaacttgtcgtggatcaa
gtagtagagattatcggcggtccattcaaaggcatgaaggctactgttacaagagtagat
catgacaaagaagaagctacagtgattttacttgacgcaccataccaattgccagttact
gttgatgcaaactatctcaaaccatcaactcattag
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