Nitrosotalea devaniterrae: NDEV_0353
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Entry
NDEV_0353 CDS
T04889
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ndv
Nitrosotalea devaniterrae
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndv03016
]
NDEV_0353 (truB)
Enzymes [BR:
ndv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NDEV_0353 (truB)
Transfer RNA biogenesis [BR:
ndv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NDEV_0353 (truB)
Prokaryotic type
NDEV_0353 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CUR51118
UniProt:
A0A128A1A0
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All DBs
Position
1:327403..328401
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AA seq
332 aa
AA seq
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MTLKQLQNLRVVDQDITNDVYGTYYDKRSIEQLLEYGFILLDKPNGPTSHETVSWVKKIL
HVPKAGHSGTLDPQVSGLLPIGLGEATKALIVLLLGPKEYHALGRLHTLPPKEKLSDVLK
QLTGKIFQKPPQRSAVSRQTRIRHVYEIEVIEQKERLLLLRILCEAGTYVRKIFYDMGEI
LSEGATMIELRRTRVGHFNEESNLVKMHDLVDAYALWKENGDDTKLRRIMMPIELTLSEI
KSVVIRDSAVDALCHGAQLAIPGILEISPGLKRGDFVAIYTQKGEVVALAEATLTEDEIV
ENTKGFAFKIKRIIMAPNTYPKSWRSKPVVNN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgactctcaaacaattacaaaatcttagagtagtagaccaagacatcacaaatgatgtc
tatggtacatattatgacaagagatcaattgaacaactcttagaatacggtttcatttta
cttgataaaccaaatggtccgacaagccatgaaaccgtatcctgggtaaaaaaaatactg
catgtcccaaaggcaggtcacagtggaacacttgatccccaagtctctggactcttacca
ataggtcttggggaagcaaccaaagccctcattgtattattgcttggaccaaaagaatac
catgcacttggaagattgcatacgcttccaccaaaagaaaaattatctgatgtgctaaaa
caactaacaggaaaaatattccaaaaaccgccgcaaagatctgctgtatcaagacaaact
aggataagacatgtgtatgaaatcgaagtcattgaacaaaaagaacgactgctacttctt
agaatcttatgtgaagcaggaacctatgtgagaaaaattttctatgacatgggagagatt
ctcagtgaaggtgcaacaatgattgaacttcgaagaactagggtgggacactttaacgag
gaatctaatcttgtaaaaatgcatgacctagttgatgcatatgcattgtggaaagaaaat
ggtgatgatacaaaactacgacgaataatgatgccaatagaacttaccctcagtgaaata
aaatcagttgtaatcagagactcggcagttgatgcgttatgtcatggagcacagcttgca
atacctggaattcttgaaatctctcctggactaaagcgtggagattttgttgccatatat
acacaaaaaggtgaggtagttgctcttgcagaagccaccttgactgaagatgagattgtt
gaaaatacaaagggctttgcctttaagattaagagaatcattatggctccaaacacatac
ccaaaaagttggagatcaaagcccgtagttaacaattaa
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