Nitrosotalea devaniterrae: NDEV_0422
Help
Entry
NDEV_0422 CDS
T04889
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ndv
Nitrosotalea devaniterrae
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndv03016
]
NDEV_0422
Enzymes [BR:
ndv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NDEV_0422
Transfer RNA biogenesis [BR:
ndv03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NDEV_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
CUR51187
UniProt:
A0A128A1J6
LinkDB
All DBs
Position
1:380478..381047
Genome browser
AA seq
189 aa
AA seq
DB search
MSELESKVEGVLVKDHALVSDKDMQHVLELKGFGEMVKKKFLLEPFESLYLLYVDRLKLF
RGKQVMDFDSLMTECMKADPDAFTKFLIYRDLRTRGYVAKDGFGFGSDFRVYERGQFGEK
GAKYVVFGMTEGKREKIGLLQKQIEDITTMGKEPVLAVIERRGEVIYYKVSKIQFHQNKD
QPMSSSIES
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattagagtccaaggtagaaggagtgctggtaaaagatcacgcacttgtatct
gacaaagacatgcagcatgtcttggaactaaaaggatttggagaaatggtgaaaaagaaa
ttcctcctagaaccgtttgaatcattatacttgctctatgttgacagactcaaacttttc
aggggaaaacaagtgatggattttgattctcttatgaccgaatgcatgaaggctgatcct
gatgcttttactaaatttctcatatatagagatctaagaaccaggggatatgtagcaaaa
gatggttttggatttgggtctgactttagagtttatgagcgagggcaatttggagaaaag
ggtgcaaaatatgttgtatttgggatgactgagggcaagcgggaaaaaattggtttacta
caaaaacaaattgaagatatcactacaatgggaaaagaaccggtacttgctgtaattgaa
cgacgtggagaggtaatttactataaagtttctaaaatacaatttcatcaaaataaagat
caacccatgtcttcaagtatagaatcttaa
DBGET
integrated database retrieval system
