Nitrosotalea devaniterrae: NDEV_0763
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Entry
NDEV_0763 CDS
T04889
Name
(GenBank) Collagen triple helix repeat
Organism
ndv
Nitrosotalea devaniterrae
Brite
Glycosaminoglycan binding proteins [BR:
ndv00536
]
Heparan sulfate / Haparin
Extracellular matrix molecules
NDEV_0763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
CUR51528
UniProt:
A0A128A2G1
LinkDB
All DBs
Position
1:688929..690560
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AA seq
543 aa
AA seq
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MSSKDNTIEVSGESPFKLSSGVFEVQIAICDAPPSLDDIKRRSFHLLWKENFHLRVKDKQ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NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaaagataacactatagaggtatctggcgagtcacccttcaaactgtcatcg
ggtgtctttgaggtacagattgcaatatgtgatgccccgccatcacttgatgatatcaag
cgaagaagttttcacttgctatggaaagaaaactttcatctgcgggttaaagataaacaa
ttctcccaagtattaggatctgcaaaaaacccattgcctgattctgtatttcaaagagga
actgtctgggttgttgtaattgatcaattctcttctattcattcaagttttcaagttgat
gtaccgcgaactgcagagtatgtggagcatcgacaagaacccgagcctgtaacacattct
acaaaatctgatgcggatagttctagatcaaaacctactgttgaacattattctggtgaa
agaggttctcgtggcccatctggtccaatgggtcctgcaggccctatgggtcaagcaggt
ccaatgggcccagctggagtacatggcccacctggtcctatgggtgtacaaggagacaag
ggtcccccaggtccaattggtgacaagggtgacaaaggtccttcaggtcctccaggtgac
aaaggtgaccgaggagacaagggtccaattggtgacaagggaatcactggtgacaaaggt
ccactgggtccttcaggtccacccggagacaaaggtccacatggtccaaccggtgacaaa
ggtgaccgaggagacaagggtccaattggtgacaagggaatcactggtgacaaaggtcca
caaggtgacaagggtcctcgcggtgatgaaggagaaaaaggcgaaaagggcgataaaggt
gacaagggtgataaaggcgataaaggattaactggagaaattggaccgcttggagaaaaa
ggtccgacaggtcctccaggtccacaaggtgataaaggaatcattggtcctccgggtgaa
caaggtccaaagggtcctcttggtacgccgggtgacaaagggttgccaggtccacagggt
ccacaaggtgacaagggattaacaggtccacaaggtccacttggagaaaaaggtccacaa
ggtccccaaggtcctgccggtgaaaaaggtcttaccggaattccaggtccacaaggtgac
aaaggtccaagaggattgccaggtccaagtggtgaacaaggtccgcgtggaactcctggt
ccatccggtcctccgggtccacaaggaattcaaggtccacaaggtgaaaaaggtacaacc
ggtccacaaggtgtacccggtgacaagggtcctccgggaatccaaggtctaccaggtcca
gttggtccattaggtccacaaggtccaccaggtgacaaaggtccacaaggtgtacagggt
ccacaaggagacaagggattaacaggtcagcaaggtccacttggagataaaggacaacaa
ggtccacaaggacaacaaggtattcctggtgaatcaggtccacgaggtcctccaggtcca
ccaggtgacaagggtcctactggattttctgaacaagaacgtgcattgataactcaactg
cttgagattttatcttcgaaaaatgtgttgacaactgagcaacaaataaaattgatgagt
tttctttactga
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