Nitrosotalea devaniterrae: NDEV_0874
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Entry
NDEV_0874 CDS
T04889
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NDEV_0874 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndv03400
]
NDEV_0874 (uvrB)
DNA repair and recombination proteins [BR:
ndv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDEV_0874 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NDEV_0874 (uvrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
P-loop_SecA
AAA_19
Cas3-like_C_2
Met_synt_B12
DUF2785
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CUR51639
UniProt:
A0A128A2R4
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Position
1:complement(782701..784641)
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AA seq
646 aa
AA seq
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MLENPSFELVSEFTPIGDQQQAIEQLVQGIQKKKIQTLLGVTGSGKTFTVANAIAKTGKK
TLVISHNKTLAAQLYAELKQFFPKNNIGYFVSYYDYYQPESYIVQTDTYIEKDTQINEKI
EKLRLEATAMLLSGEPTIIIATVSCIYSLGSPSEWETMAITIEKGIEIGRSALIKKLVSA
RYDRNDTELLAGRFRIKGDTIDVIPAYSDSVVRISLFGDDVEKISICDPVSLEEKKQISK
IKIYPAKHYLVAADVRKTAVQSIRDELKQRLSELPELERQRLEMRTKYDLEMIEELGYCS
GIENYSRHFDGRKPGEPPFCLLDFFGDDFLLVIDESHVTLPQLHGMYNGDHTRKKSLIDY
GFRLTSAFDNRPLKFEEFERYIKNTIFVSATPGDYEKKKSFQIVEQLTRPTGLVDPTVEV
RKTTNQMDDLIIEIKKRVEKNQRVLVTTLTKRMAEDLAEYLSKHQVKVRYLHSEIENLQR
TEIIRQLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNITSLIQTFGRAARN
VDGSVIMYAEKMTQSMSLAISETDRRRKKQVEYNQKMGITPASIVKAIPQQTIVLDETKH
MSKHDIQTLAIEIEATMKRYAEDLDFENAIEYRDKLTRIQKQLRNE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
ttgctagaaaatccaagctttgagctagtttctgaatttacgcccataggcgaccagcaa
caagcaatagagcagctagtccaagggatacaaaaaaagaagatccagaccctgcttggt
gtaacaggcagtggcaagacatttacggttgcaaacgcaattgccaagaccggaaaaaag
acactggttatatcacataacaagacattggcggcccagctttatgcagaactaaagcag
tttttcccaaaaaacaatatcggatattttgtatcatactatgattactatcaacctgaa
agttatatcgtccagacagatacgtacatcgaaaaagatacccagataaatgaaaagata
gaaaaattgcgtctagaggcaactgcgatgctcttgtcaggagagcccacaatcataatt
gctacagtctcttgcatctattcacttggctcacctagtgagtgggagacaatggcaatt
acgattgaaaaaggcatagagattggaagaagtgcattaatcaaaaaacttgtcagtgca
agatatgatagaaatgataccgaacttttggcaggcaggtttagaataaagggggatacg
attgatgtgattccagcatattctgattcagttgtaaggatttcattatttggagacgat
gttgaaaagatatcaatttgtgatccagtatcacttgaagaaaaaaaacagatttcaaag
attaagatctatcctgcaaaacactatcttgttgcagcagacgtaagaaagactgcagtc
cagtcaatcagagacgaattaaaacaaagattgtcagagttgccagagcttgaaagacaa
agactagagatgcgaaccaagtatgacttagagatgattgaagagcttggatattgctct
ggaattgaaaattattcaagacattttgatggaagaaaaccaggtgagccaccattttgt
ttactagatttctttggggatgactttttgcttgtgattgacgaatcacatgtaacatta
ccccaacttcatggcatgtataacggtgatcataccagaaaaaaatcgctgattgattac
ggattcagactcacgagtgcatttgataacagaccactaaaatttgaagaatttgaaaga
tacatcaaaaataccatttttgtttctgcaacacctggcgattatgaaaaaaagaaaagc
ttccaaattgttgaacaattaacaagacctacaggacttgtagacccaacagtggaagta
agaaaaactacaaaccaaatggacgatttaatcatagaaataaaaaaacgcgtagaaaaa
aatcaacgtgttctagttacaacactgacaaagagaatggcagaagatttggcagaatac
ttgtccaagcaccaagtcaaggtgcgttacttacattctgagattgaaaatctccaaaga
actgagataatcaggcagctcagactaggagaatttgatgtcttggtcggaatcaacctg
ctaagagaaggccttgatattccagaggtgtcccttgtagcaatacttgatgcagacaag
gagggatttttgagaaacattacaagtctaatccagacatttggaagggctgcaagaaat
gtagatggttcagttataatgtatgcggaaaaaatgacccagtcaatgtcacttgccata
tctgaaacagacagacgaagaaaaaaacaggtagaatacaatcaaaagatgggaatcact
ccagctagcatagtgaaagcaattcctcagcaaacaatagtactagacgagacaaaacac
atgtcaaagcacgatatccagacccttgcaattgagatagaggctaccatgaagcgttac
gcagaagatctagactttgagaatgcaattgaatatcgcgataaactgacaaggatacaa
aaacaattacgaaatgaatga
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