Nitrosotalea devaniterrae: NDEV_1298
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Entry
NDEV_1298 CDS
T04889
Symbol
tbp
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NDEV_1298 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndv03000
]
NDEV_1298 (tbp)
03021 Transcription machinery [BR:
ndv03021
]
NDEV_1298 (tbp)
Transcription factors [BR:
ndv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
NDEV_1298 (tbp)
Transcription machinery [BR:
ndv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NDEV_1298 (tbp)
RNA polymerase III system
TFIIIB
NDEV_1298 (tbp)
RNA polymerase I system
SL1/TIF-1B
NDEV_1298 (tbp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
CUR52063
UniProt:
A0A128A3W7
LinkDB
All DBs
Position
1:complement(1137537..1138097)
Genome browser
AA seq
186 aa
AA seq
DB search
MPQTKPIVDIVNVVASASVDQKIDLVAITKEFPDVEYHPEQFPGLVFRLKSPKTATLIFS
SGKMVCTGSKSEEAAVNAVNTVVQRLRKGKIKIKKNPEITIQNIVASVSLGGKVHLEKAA
RSLPRSMYEPEQFPGLIHRMLDPRSVVLIFASGKLVCTGTKKEAEVYRAVHNLHTLLEEK
KLMEYE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaacaaaaccgattgtcgacatcgtaaatgtggttgcctctgcttcagtagac
caaaaaattgatcttgtagcaattacaaaagaatttccggacgttgaatatcatcctgaa
caattcccaggtctggtttttagattaaagtctccaaaaactgcgacattgatcttcagc
tcaggtaaaatggtttgtactggctcaaaatccgaagaagcagcagtaaatgctgtaaat
accgtagtacaaagactccgaaaaggcaagataaaaataaaaaagaatccagaaattaca
attcaaaacatcgtagcttctgttagtcttggtggcaaggttcacttggaaaaagccgca
cgtagtcttccaagaagtatgtatgaaccggaacaatttccaggtttgatacacagaatg
cttgatcctcgttcagtggttctcatctttgcctctggaaaactagtatgtactggaaca
aagaaagaagccgaagtttatcgtgcagtccacaatcttcacacattgttagaagaaaag
aaactgatggaatacgagtaa
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integrated database retrieval system