Nitrosotalea devaniterrae: NDEV_1488
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Entry
NDEV_1488 CDS
T04889
Symbol
tfb
Name
(GenBank) Transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NDEV_1488 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndv03021
]
NDEV_1488 (tfb)
Transcription machinery [BR:
ndv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NDEV_1488 (tfb)
Prokaryotic type
Archaeal type
TFB
NDEV_1488 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Raptor_N
DZR_2
Motif
Other DBs
NCBI-ProteinID:
CUR52253
UniProt:
A0A128A4G5
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All DBs
Position
1:1283270..1284280
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AA seq
336 aa
AA seq
DB search
MSIQNNITEQNSNICVSCMGKLIVDLEKNENICSNCGIVTSHDSYHNSSYDVDHSGNNEP
TSSMMYDISLSTVIDKKNVDASGKQIYGSFEMEKLRRLNKFTISNDSKIRNLNKAMADIR
RITGILGFGNLIAERASYIYRKALNKDLIRGRSITGISVAAIYIACKDVGVSFPIDKVGD
YVENISKKTTVHYYKFLLRQMKMSVSIPEPSQNISKIAARAKLGGKTQRKALDILSKVGD
DPILIGKKPISLAAAALYMAALETKEYTTQLRLAVAAELTTITIRKRYLEIAQILKERSL
PVPPEIEPKDEYLEETIPLQDSPDCSKPHELIQVEL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatacaaaataacataacagaacaaaactcaaacatatgcgtctcatgcatggga
aaattaattgttgatttagagaaaaatgaaaatatatgcagtaactgtggcatagtgaca
tctcatgattcatatcataattcaagctatgatgttgatcattcaggcaacaatgaacct
acatcatctatgatgtatgacatttcactttctactgtaattgataaaaaaaatgtagat
gcaagtggaaaacaaatctatggcagttttgagatggaaaaactaagacgattaaacaag
tttacaatctcaaatgattccaagattagaaatttgaacaaggcaatggcagacatacgc
agaataacaggaattctaggatttggaaatttaattgcagaaagggcatcatacatttat
cgtaaagcattaaacaaagacctgatcaggggccgctccattactggaatttcagttgct
gcaatctatatcgcatgcaaagatgtcggcgtttcatttccaatagacaaggttggagat
tatgtagaaaatattagcaaaaagacgactgtacattattacaaatttttgctcaggcag
atgaagatgagtgtgagcataccagagccatcacagaacatctcaaagattgcagcaaga
gcaaaactaggcggtaaaacacaacgaaaggcactagacatattatccaaagttggagac
gacccaatcctaataggaaaaaagccaatatcgctagcagctgctgcactatacatggca
gcacttgagacaaaagagtataccacgcagctaagacttgcagtagcagcagagcttaca
accataacaatacgaaaaagatacctggaaattgcccagatattaaaggagagatcgtta
ccagtaccaccagagatagaaccaaaggacgaatatttagaagagaccattcccctgcaa
gattctccagattgctcaaaaccacatgaattgatccaagttgagctctag
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