Nitrosotalea devaniterrae: NDEV_1593
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Entry
NDEV_1593 CDS
T04889
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ndv
Nitrosotalea devaniterrae
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndv03016
]
NDEV_1593
Enzymes [BR:
ndv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NDEV_1593
Transfer RNA biogenesis [BR:
ndv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NDEV_1593
Prokaryotic type
NDEV_1593
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF5396
DUF7774
Motif
Other DBs
NCBI-ProteinID:
CUR52355
UniProt:
A0A128A4S2
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All DBs
Position
1:1376698..1377897
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AA seq
399 aa
AA seq
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MVPNLDKLIGISTYCTKTEGTGGKIKSTPDQFFVSEILREKSLGKISSSGSYTVYKLKKQ
GIDTNHALSDIFTKYGLRLKALGLKDANATTEQYVCDMTTGRSTDTLVTNRYTLEKIGLV
QKPLTKKDMVGNHFKIKIEDANFSKVIQFADHEKILNFFGYQRFGSKRPVSHLIGKAILQ
RNFDHAVETLLSFTSEYDLPHNNKIRNMLKDKSNYSKVFDQVPPQMDIEKIVLDEMINHG
DALKALRAIPIQLRRFFVEAFQSFVYNQTVSKAYEFGEDMMQPQQGDVCFDKDDNLGRYQ
NDPMQRLAIPLVGYSYSKKNRFDNFISQILTEQQITPKEFFIKEMQEASEEGGFRQAVIS
CHDFVIKEPYVDFTLSRGSYATILLREIIKPSDPVAAGF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtggttcctaacctagacaaactgattggaatctccacttattgtaccaagacagaaggt
actggaggcaagataaaatcaacacctgatcaattttttgtctcagagatactaagagaa
aagtcacttggtaaaatttcatcttctggaagttataccgtatacaagctaaaaaaacaa
ggcattgacacaaaccatgcactgtcagacatttttacaaaatatggccttaggctcaag
gcacttggcctaaaggacgcaaatgccacaacagaacaatacgtctgcgacatgacaact
ggaaggtctactgatacactagttacaaacaggtatacacttgaaaaaattggactagtt
caaaagcctttgacaaaaaaagacatggtaggaaaccatttcaagataaaaatagaggat
gcaaatttttcaaaggtcatacagtttgcagatcatgaaaagatcctaaattttttcgga
tatcaaagatttggaagtaagcgacctgtgtcacatttgataggaaaggccatcttgcag
agaaactttgatcatgctgttgagaccctgctttcttttacttcagagtatgatttgcca
cacaacaacaagatacgcaatatgctcaaagacaagtcaaactattccaaagtctttgac
caagttcccccacagatggacattgaaaaaattgtactagatgaaatgataaaccacggc
gatgcgctcaaggccttgcgtgcaataccaatacagttacgcagattttttgttgaagca
ttccagtcatttgtgtacaaccagacagtatcaaaggcatatgaatttggagaagacatg
atgcaaccacaacaaggagatgtatgttttgacaaagatgacaatctcggaagataccaa
aatgatcccatgcagagactagcaataccgcttgtgggttattcatattcaaaaaaaaat
agatttgacaatttcatatcccagatactaacagagcagcagataactcccaaagagttt
ttcataaaagagatgcaagaggcaagcgaagaaggaggatttaggcaggcagtgatatct
tgccatgattttgtaatcaaagaaccatacgtggattttacactctcaagaggctcgtat
gcaacaatattgctacgagagataatcaagccttcagacccagtagctgccggattttaa
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