Nitrosotalea devaniterrae: NDEV_1795
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Entry
NDEV_1795 CDS
T04889
Name
(GenBank) Phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03410
Base excision repair
ndv03430
Mismatch repair
ndv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDEV_1795
03430 Mismatch repair
NDEV_1795
03440 Homologous recombination
NDEV_1795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndv03400
]
NDEV_1795
DNA repair and recombination proteins [BR:
ndv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NDEV_1795
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NDEV_1795
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NDEV_1795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
CUR52557
UniProt:
A0A128A5F5
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All DBs
Position
1:1535441..1536859
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AA seq
472 aa
AA seq
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MAKLDQSLSYFHDRVSDCIKTGKNISVITHLDCDGITSGSIVTKSLIRSGAKCTVRTVNE
FSKNIIEKMKSDSRQFHIITDLGGGFAKDIDNALDDNWIVVDHHQIPQEEFDNQKVINAW
KYDVDGGKDVSAGGMAYLVSKALHKENTDLAWIAVVAALGDRQDQGEKKSFTGINLEIAS
TAKKNNQVEIDLDILLVGRETRPLPDALAFTSQPFIEGLTWNRDACLSLLNSSGIKLKDG
SRWRVPAELTEDEKRTLLQTISKYISTKNASDILDELVGYTYTLSGEDKRSFLRDAREFS
TMLNSCGRIRKAGVGIAICMGDRTKMLQEGENILVEYRTFLRTYMNTLSSERWRITDNGH
YLMVNGEGLVPENMTGAVSSLLGGSQKNTGKIIILRTNGDEGTIKFSSRKSTGCKSEVNL
GLLMRECAAKVSGVGGGHAAAAGARITKDKLDEFLDHLEQNVTRMQSSSISE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttagaccaatcattatcttattttcatgatagagtttctgattgcatcaaa
acaggtaagaatatttctgtaattactcatcttgattgtgacggcataacttctggaagt
attgtaacaaaatctttgatcagatctggcgcaaaatgtaccgtacgtactgttaatgaa
tttagcaaaaacattattgaaaaaatgaaaagtgattcaagacaatttcatataatcaca
gatcttggtggcggatttgcaaaagatatcgataatgcactagatgataactggatagta
gttgatcatcatcagataccacaagaagagtttgacaatcaaaaagtaatcaatgcctgg
aagtatgatgtagacggtggaaaagatgtgtctgcaggaggcatggcatatcttgtttca
aaggctctccacaaagagaatacggatttggcatggattgcagttgtagctgcactaggt
gatcgtcaagatcaaggtgaaaagaagtcatttacaggaataaatttggaaatagcatct
actgcaaagaagaataatcaagtcgaaattgatttggacattttgcttgtaggaagagag
acaaggccacttccagatgcacttgcatttacctcacagccatttattgagggtttaaca
tggaatcgtgatgcatgcctttcacttttgaattcttcaggaataaaattaaaggatggt
agtagatggcgtgttcctgcagaactgacagaagatgagaaaagaacacttttgcagaca
atatcaaaatacatttcaactaaaaatgcaagcgatatactagatgagcttgtaggatac
acgtatacattatccggagaagataagagaagtttccttagggatgcaagagagttttca
actatgctaaactcttgtggcaggattcgtaaggcgggagttggaatcgcaatttgcatg
ggagatagaaccaagatgttgcaggaaggtgaaaacatcttggtagagtatagaacattc
ttgagaacctacatgaacacactttctagtgaaagatggagaataacagataacggtcat
tacttgatggtaaatggtgaaggcctcgtacctgaaaatatgacaggtgcagtatcatca
cttcttggtggatcacagaaaaacacaggaaagataatcatacttagaactaatggtgat
gaaggaacaataaagttctcttcacgcaaatcaaccggatgtaaatcagaagtaaattta
ggattgctaatgcgagaatgcgctgcaaaagtgtctggtgttggtggaggtcatgcggca
gctgctggagcaagaattacaaaagacaagttagatgaattcttagatcacctagaacaa
aatgtcactagaatgcaaagttcaagtatttctgaataa
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