Nitrosotalea devaniterrae: NDEV_2085
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Entry
NDEV_2085 CDS
T04889
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03030
DNA replication
ndv03410
Base excision repair
ndv03420
Nucleotide excision repair
ndv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDEV_2085 (pcn)
03410 Base excision repair
NDEV_2085 (pcn)
03420 Nucleotide excision repair
NDEV_2085 (pcn)
03430 Mismatch repair
NDEV_2085 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndv03032
]
NDEV_2085 (pcn)
03400 DNA repair and recombination proteins [BR:
ndv03400
]
NDEV_2085 (pcn)
DNA replication proteins [BR:
ndv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NDEV_2085 (pcn)
DNA repair and recombination proteins [BR:
ndv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NDEV_2085 (pcn)
MMR (mismatch excision repair)
Other MMR factors
NDEV_2085 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
NDEV_2085 (pcn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad9
Tenui_N
AgrD
Motif
Other DBs
NCBI-ProteinID:
CUR52847
UniProt:
A0A128A693
LinkDB
All DBs
Position
1:complement(1788498..1789244)
Genome browser
AA seq
248 aa
AA seq
DB search
MVFSAKTGGSEEWKAVISAISTLVEEATFEATGEGIAFRGMDPSHVALIDIAWPNSAFEK
YVCDADVKFGVRIDEFSKLIKRSDKKDNIEISISEDKLLLVTIGKNKKYKMRLIESSATD
TPLPKITYNAKVGVTSAEFDKILGDIQVVSEYLSINANPTKAEFSGRGDSGEAIITLEKG
MPEMPELEIKEDSNATYSLEYLNSIVKAVGTVAGTVVCEYSSKMPLRLEFKVANIGRIHF
YLAPRVES
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttggtattttctgcaaagactgggggttctgaagaatggaaagcagtcatatctgccata
tcgactttagttgaagaagctacattcgaagctacaggcgaaggaattgctttccgaggg
atggatccatcacatgtagcattaattgatattgcttggcctaattctgcatttgaaaaa
tatgtttgtgatgcagatgtcaagtttggagtaagaatagatgaattttcaaagttgatc
aaacgatctgataaaaaagacaatatagaaatcagtatttctgaagacaagcttttgctt
gttacaataggtaaaaataaaaaatacaaaatgagattaattgaaagctcagcaactgat
acaccacttccaaaaattacttacaatgccaaagtgggtgtaacatctgcagaatttgac
aaaatacttggtgatatacaagtagtctcagaatatctctcaattaatgcaaatcccaca
aaagcagaattttcagggcgtggtgattcaggtgaggcaattataacactagaaaaagga
atgccagagatgccagaactcgagataaaagaagacagcaatgcaacctatagcctagaa
tatctcaatagtatagtaaaagcagtaggtactgttgcaggaacagtagtttgtgaatat
tcaagtaaaatgccacttagactagaatttaaggtagcaaacataggaagaattcacttt
taccttgctcctagagtagagagttaa
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