Nocardiopsis eucommiae: KGD82_15525
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Entry
KGD82_15525 CDS
T08767
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nec
Nocardiopsis eucommiae
Brite
KEGG Orthology (KO) [BR:
nec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KGD82_15525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nec03021
]
KGD82_15525
Transcription machinery [BR:
nec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KGD82_15525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
KORA
Motif
Other DBs
NCBI-ProteinID:
QVJ00218
UniProt:
A0A975L7A1
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Position
3392048..3393457
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AA seq
469 aa
AA seq
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MTSTALDASGPEAEVPDGNAPTEGRAAHEALTDLITQGRAQGHLSLSELRTAFSAAGVTS
SDGRSILRELTENGVRLANGGDDSAMVADPDAEDDVLENTLIATVPDTDEAPKAATGKAA
SRKGPSTRRKARTTRRAKKTETNQNTTDPETGEADLDDQSPAMGDSVHTYLKAIGRRQLL
TAEQEVDLAKRVEAGLYAEYRLGLHGEVDGAVPMADAERDELEWVAEDGRKAKSHMLEAN
LRLVVSVAKKYSDRGMSLLDVVQEGNLGLIRAVEKFDYTKGFKFSTYAMWWIRQAIQRGF
ADSARTIRLPVHVLELLSKVSRLERDMHQALGREPTPEELGLELDKTPAQIEELLRVTRQ
PISLDSTIGEDGETRIGDLIEDVDASEASEVVDRQLMADQLRNALSDLEPREATIMSLRF
GLMDGRPRTLDEIGKHLGLTRERIRQLEKQSLSKLRHPSRAQQLLDFAS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcactgccctagacgcttcgggccccgaggccgaagtccccgacggcaacgct
ccgaccgagggccgtgccgcccacgaggctctgaccgacctgatcacccaggggcgcgcc
cagggacacctgtccctctcagaactacgtaccgctttctccgcggccggagtcacctcc
agtgacggccgctccatcctgcgtgaactcaccgagaacggggtccgactcgccaacggg
ggcgacgactccgcgatggtggccgaccctgacgccgaggacgacgtgctggaaaacact
ctcatcgcgacggtacccgacaccgacgaggcacccaaggccgcgaccggcaaggccgcc
tcgcgcaagggcccctccacccggaggaaggcccgcaccacgcggcgcgccaagaagacc
gagaccaaccagaacaccaccgacccggagaccggcgaggccgacctcgacgaccagtca
cccgccatgggcgactcggtccacacctacctcaaggcgatcgggcggcgtcagctgctc
accgccgagcaggaggtggacctggccaagcgcgttgaggccggactctacgccgagtac
cggctcggactgcacggcgaggtcgacggggcggtccccatggccgacgccgagcgcgac
gaactggagtgggtggccgaggacggccgcaaggccaagtcccacatgctggaggccaac
ctccgcctggtcgtctccgtggccaagaagtacagcgaccggggcatgtccctgctggac
gtggtgcaggagggcaacctcggcctcatccgcgccgtggagaagttcgactacaccaag
ggcttcaagttctccacctacgccatgtggtggatccgccaggccatccagcgcgggttc
gcggactccgcgcgcaccatccgcctgcccgtgcacgtcctggagctgctcagcaaggtg
agccgcctggagcgcgacatgcaccaggcgctgggccgcgagcccacccccgaggagctg
ggcctggagctggacaagaccccggcccagatcgaggagctgctgcgcgtcacccgccag
ccgatcagcctcgactccaccatcggtgaggacggcgagacccgcatcggtgacctgatc
gaggacgtggacgcctcggaggcctccgaggtggtcgaccgccagctcatggccgaccag
ctgcgcaacgccctgtcggacctggagccgcgcgaggcgaccatcatgtcgctgcggttc
gggctgatggacggccgaccgcgcaccctcgacgagatcggcaaacacctggggctcacc
cgggagcgcatccggcagctggagaagcagtcgctgtccaagctgcgccacccgagccgg
gcccagcagctgctggacttcgccagctga
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