Nocardiopsis eucommiae: KGD82_15955
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Entry
KGD82_15955 CDS
T08767
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
nec
Nocardiopsis eucommiae
Brite
KEGG Orthology (KO) [BR:
nec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nec03019
]
KGD82_15955
Enzymes [BR:
nec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KGD82_15955
Messenger RNA biogenesis [BR:
nec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KGD82_15955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QVJ00268
UniProt:
A0A975L825
LinkDB
All DBs
Position
complement(3492957..3495812)
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AA seq
951 aa
AA seq
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MSSHSERYAAFRRRQNASSAAIEAFQGLYGFEFDPFQIRACKALEGGHGVLVAAPTGSGK
TVVGEFAVHQALNEGTKCFYTTPIKALSNQKYNDLVRRYGADQVGLLTGDNSVNGEAPVV
VMTTEVLRNMLYEGSSTLGGLAYVVMDEVHYLADRFRGAVWEEVIIHLPESVRMVALSAT
VSNAEEFGEWLQQVRGDTTVIVDEKRPVPLWQHVMVGRRIHDLFVDERPEETGGGDGTED
GDEGGGRSRRKRERRRAQHQRPREIQVGGRKLLINPYLTRTAEDDSRTTQLANRRRHPQT
RARGNVRPRTRFAPPSRPMIIEELDAEGLLPAITFIFSRAGCDDAVRQCVASGLVLTTPD
EAAHIREYAESRCADIPRADLTVLGFDSWLRALEAGISAHHAGMLPTFKEIVEHLFSKGL
IRAVFATETLALGINMPARTVVIEKLDKWNGETHASLTPGEYTQLTGRAGRRGIDVEGHA
VVVWQAGTDPESVASLAGTRTYPLNSSFQPSYNMAVNLVGQVGRQRSRNMLEASFAQFQA
DRAVVGLVKQLRKHEEALEGYASAAECHLGDFMEYARLRRALSDRESLLARNRSSQRRDE
ALESLERLRPGDIIRIPAGRYSGHAVVLDPGLRHDLPAPLVLTVDKQVKRVNSSDFPVPV
HPSGRMRIPKSFSARSPRSRQDLASTLRNKLKERGDDPSFERGRGRGAQEDPEVQRLRAE
LREHPCHGCSDREDHARWAERYFRLQKETDALRRRVEGRSHVISRTFDRVCGVLEDLEYL
SGDDVSEDGGKLAKIYSELDLLVAECLRRGVWEDLNPVELAACAAALVYEARRNDDAYPR
LPEGRVEEALTEMTRLWGELNEVEARHRVSFLRQPDLGFVWTAHRWARGDRLDAILRQSD
MTAGDFVRTAKMLVDMLSQIAGAAADPHVRGKARKAADLVRRGVVAYSSFN
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcactccgagcgttacgccgccttccgccggcgccagaacgcctccagcgcc
gcgatcgaggccttccaggggctctacgggttcgagttcgaccccttccagatcagggcc
tgcaaggccctggagggcggacacggggtgctggtcgccgcgccgaccggctccggcaag
accgtggtcggtgagttcgccgtgcaccaggccctcaacgagggcaccaagtgcttctac
acgacgccgatcaaggccctgtcgaaccagaagtacaacgacctggtccggcgctacggc
gccgaccaggtcggcctgctcaccggtgacaacagcgtcaacggtgaggcgcccgtggtc
gtcatgaccaccgaggtgctgcgcaacatgctgtacgaggggtcgtccaccctcggcggg
ctggcctacgtggtcatggacgaggtgcactacctcgcggaccgcttccggggcgcggtg
tgggaggaggtgatcatccacctccccgagtcggtgcggatggtcgccctctccgcgacc
gtcagcaacgccgaggagttcggtgagtggctccagcaggtgcgcggcgacaccacggtg
atcgtcgacgagaagcgccccgtcccgctgtggcagcacgtgatggtgggcaggcgcatc
cacgacctgttcgtcgacgaacggccggaggagaccggcggtggggacggcaccgaggac
ggtgacgagggcggcggccggagcaggcgcaaacgggaacgacgccgcgcccagcaccag
cgcccacgcgagatccaggtgggcgggcgcaagctgctcatcaacccctacctgacccgc
acggcggaggacgactcccgcaccacccagctggccaaccggcggcgccacccgcagacc
cgggcccggggcaacgtgcgtccgcgcacccgcttcgccccgccctcgcggccgatgatc
atcgaggaactggacgccgagggcctgctcccggcgatcaccttcatcttcagccgcgcc
ggatgcgacgacgccgtccgccagtgcgtggcctccggactggtgctcaccaccccggac
gaggccgcccacatccgggagtacgcggagtcgcgctgcgcggacatcccgcgcgcggac
ctgaccgtgctcggcttcgactcctggctgcgcgccctggaggcgggcatctccgcgcac
cacgcggggatgctccccaccttcaaggagatcgtcgagcacctgttctcgaaggggctg
atccgggcggtcttcgccacggagacgctggccctgggcatcaacatgcccgcgcgcacg
gtggtgatcgagaagctcgacaagtggaacggcgagacccacgcctcgctcacccccggt
gagtacacgcagctcaccggacgtgcgggcaggcgcggaatcgacgtggaggggcacgcg
gtcgtcgtgtggcaggccgggaccgaccccgagtcggtggccagcctggcgggcacccgc
acctatcccctcaactccagcttccaaccctcgtacaacatggcggtgaacctggtcggc
caggtcggccgtcagcgcagccggaacatgctggaggcgtccttcgcccagttccaggcc
gaccgcgccgtggtgggactggtcaagcagctgcgcaagcacgaggaggccctggagggc
tacgccagcgccgccgagtgccacctcggggacttcatggagtacgcccgtctgcggcgg
gccctgagcgaccgcgagtccctgctggccaggaaccgttcgtcccagcgccgggacgag
gcgctggagagcctggagcggctgcgcccgggcgacatcatccggatcccggcggggcgc
tactcgggccacgcggtggtcctggacccgggcctgcggcacgacctgcccgcaccgctg
gtcctcaccgtcgacaagcaggtcaagcgggtcaactccagcgacttcccggtgccggtg
cacccctcggggcgcatgcgcatccccaagtcgttctccgcgcgctcaccgcgctcgcgc
caggacctggcctcgaccctgcgcaacaagctcaaggagcggggcgacgacccgtccttc
gagcggggcaggggacggggagcccaggaggaccccgaggtccagcggctgcgcgccgag
ctcagggagcacccgtgccacggttgctccgaccgcgaggaccacgcccgctgggccgag
cggtacttccgactccagaaggagacggacgccctgcgccgccgtgtggagggccgctcg
cacgtcatctcccggaccttcgaccgggtgtgcggcgtgctggaggacctggagtacctc
tccggcgacgacgtctccgaggacggcggcaagctggcgaagatctactccgagctcgac
ctgctggtggccgagtgcctgcgccggggcgtgtgggaggacctgaacccggtcgagctg
gccgcctgcgccgcggcgctggtctacgaggcacgccgcaacgacgacgcctacccgagg
ctgcccgagggcagggtggaggaggcgctgaccgagatgacgcggctgtggggcgagctc
aacgaggtggaggcgcgccaccgtgtgtcgttcctgcgccagcccgacctcggcttcgtc
tggaccgcgcaccgctgggcgcgcggcgaccggctcgacgcgatcctgcgccagtccgac
atgaccgcgggcgacttcgtgcgcaccgcgaagatgctcgtggacatgctcagccagatc
gccggggccgccgccgacccgcatgtgcgcggcaaggcccgcaaggcggccgacctcgtc
cggcgcggagtggtggcctactcctccttcaactag
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