Nocardiopsis eucommiae: KGD82_27320
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Entry
KGD82_27320 CDS
T08767
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nec
Nocardiopsis eucommiae
Brite
KEGG Orthology (KO) [BR:
nec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nec03032
]
KGD82_27320 (gyrB)
03400 DNA repair and recombination proteins [BR:
nec03400
]
KGD82_27320 (gyrB)
Enzymes [BR:
nec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KGD82_27320 (gyrB)
DNA replication proteins [BR:
nec03032
]
Prokaryotic type
DNA Topoisomerases
KGD82_27320 (gyrB)
DNA repair and recombination proteins [BR:
nec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KGD82_27320 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QVJ01576
UniProt:
A0A975LAH1
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All DBs
Position
5943958..5945895
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AA seq
645 aa
AA seq
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MAYDAGSITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHADAIEVTL
LADGGIRVADNGRGIPVGIHPVEQRPAVEVVLTTLHAGGKFDGKSYAVSGGLHGVGISVV
NALSTALDVEIRQQGHVWRQHYEMTAPTGELVKAEETDETGTEITFWADGDIFETTTYSF
ETLARRMQEMAFLNKGLSITIRDERPDHTDDGPVVNTFHYEEGLSDYVRHINAKKEPAHA
SIISFEEDGDGIAVEIAMQWNQSYTSSVHTFANTINTAEGGTHEEGFRSALTTLVNRYAR
DQKLLRDKEDNLTGDDIREGLTAIISVKLADPQFEGQTKTKLGNTEAKSFVQKVTNEHLR
DWFERNPGEAKDIVSKASQAARARVAARQARDLTRRKTLLETTSLPGKLSDCQSTNPEEC
EVYIVEGDSAGGSAKGGRNPHNQAILPIRGKILNVEKSRIDRILKNNEVQAIITALGTGI
HEEFDAEKLRYHKIILMADADVDGQHIRTLLLTLLFRFMKPLVEAGNVYLARPPLYKIKW
DQKGSDASYAFSDAERDRVIEAGIAEGKRDPRPRDMVQRFKGLGEMNANELWDTTMDPDR
RVLDQVNLEDAAQADEMFSVLMGEDVESRRAFIQRNAKDVRFLDI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttggcctacgacgcaggatcaatcacggttctcgaagggcttgaggcagtacgcaagcgc
ccgggtatgtacatcggctccaccggtgagcggggtctgcatcacctggtctacgaggtg
gtcgacaactcggtcgacgaggcgctggcgggtcacgccgacgccatcgaggtgaccctg
ctcgccgacggcgggatcagggtggccgacaacggccggggcatcccggtcggcatccac
cccgtggagcagcgccccgcggtcgaggtcgtcctcacgacgctgcacgcgggcggaaag
ttcgacggcaagtcctacgcggtctccggcggtctgcacggcgtcggcatctccgtcgtc
aacgcgctgtccacggcgctcgacgtggagatccgccagcaggggcacgtctggcgccag
cactacgagatgaccgcgcccacgggtgagctcgtcaaggccgaggagaccgacgagacc
ggcaccgagatcaccttctgggccgacggcgacatcttcgagaccaccacgtactcgttc
gagacgctggcccgccggatgcaggagatggccttcctcaacaaggggctgtccatcacc
atccgcgacgagcggcccgaccacaccgacgacggtcccgtggtcaacaccttccactac
gaggaggggctgtcggactacgtccggcacatcaacgccaagaaggagccggcgcacgcg
tcgatcatctccttcgaggaggacggcgacggcatcgcggtcgagatcgccatgcagtgg
aaccagtcctacacctcgtccgtgcacaccttcgccaacaccatcaacacggcggagggc
ggcacccacgaggagggcttccgctccgcgctcaccactctggtcaaccggtacgcccgt
gaccagaagctgctgcgcgacaaggaggacaacctcaccggcgacgacatccgcgagggc
ctgaccgcgatcatctcggtcaagctcgcggacccgcagttcgagggccagaccaagacg
aagctcggcaacaccgaggccaagtcgttcgtccagaaggtcaccaacgagcacctgcgc
gactggttcgagcgcaaccccggcgaggccaaggacatcgtgtccaaggccagccaggcc
gcccgcgcccgcgtggccgcccgccaggcccgcgacctcacccgccgcaagaccctcctc
gagaccacctccctcccgggcaagctgtcggactgccagtccaccaacccggaggagtgc
gaggtctacatcgtcgagggtgactcggccggtggctccgccaagggtggtcgcaacccg
cacaaccaggccatcctgcccattcgcggcaagatcctgaacgtcgagaagtcgcggatc
gaccgcatcctcaagaacaacgaggtccaggcgatcatcaccgccctgggcaccggcatc
cacgaggagttcgacgccgagaagctgcggtaccacaagatcatcctgatggccgacgcc
gacgtcgacggtcagcacatccggacgctgctgctcaccctgctgttccgcttcatgaag
ccgctggtcgaggccgggaacgtctacctggcgcgcccgccgctctacaagatcaagtgg
gaccagaagggcagcgacgcgagctacgccttctccgacgccgagcgcgaccgggtcatc
gaggccgggatcgccgagggcaagagggacccgcgcccgcgcgacatggtgcagcgcttc
aagggtctgggcgagatgaacgccaacgagctgtgggacaccacgatggacccggaccgc
cgcgtgctcgaccaggtcaacctggaggacgcggcccaggccgacgagatgttcagcgtg
ctcatgggtgaggacgtcgagtcccggcgcgccttcatccagcgcaacgccaaggacgtc
cgcttcctggacatctag
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