Nostoc edaphicum: HUN01_06960
Help
Entry
HUN01_06960 CDS
T07001
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HUN01_06960 (tnpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RuvC_1
Spore_III_AB
zf-piccolo
Motif
Other DBs
NCBI-ProteinID:
QMS87336
UniProt:
A0A7D7L960
LinkDB
All DBs
Position
1002789..1004015
Genome browser
AA seq
408 aa
AA seq
DB search
MQKAFKVTLIPTHNQEVLINKTIGCAIYVYNRFLALRQELYATEQKTLNYNACSQQLTLL
KKEIEWLNVVDKFALQNSLKNLETAYKNFFADLKKSKNKKGVGFPKFKKKHSCKQSYKTN
LTNGNIQVIKNRLKLPKLGWVRFHKSQYITGKLVNVTISRTSSGKYIASINSETEIEKHP
QVSQNIGIDLGIKSYLVTSDGEVVENPKYYRTQTRKLGKAHKKLSRSVRGSSNRVKAKIK
LARTYSRITNLRDDFLHKLSTRLIKENSIICIEDLRVANMVKNHKLALSISDASWSKFVA
MLEYKALWHDRIVQKVGTFYPSSQTCNCCGFVNPLVKDLNLREWSCSSCNSYNLRDKNAA
LNILSEGLRLLTAVGTPEVIKSACGGIVSPELIQAEFVEAGITRLSVV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atccaaaaagcatttaaagttactctcatacccacgcataatcaagaagtcttaatcaac
aagacaattggttgtgccatatatgtgtataaccgctttttggcactaagacaggagtta
tatgccacggagcagaagacattaaactataatgcttgcagccagcagctaactctactc
aaaaaggagattgagtggttgaatgttgtagataaatttgctctgcaaaactcactcaag
aatttagagacagcatacaaaaacttttttgctgacttgaagaagtctaaaaataaaaaa
ggtgtcggcttccccaagttcaaaaagaagcatagttgcaagcagtcttacaaaacgaat
cttactaacggtaatattcaggtaatcaagaatcgtttaaagcttccgaagttagggtgg
gtaaggttccacaaatcccaatacattactgggaagcttgtcaacgttactattagtcgc
acttcatctggcaaatatattgctagtatcaatagcgaaactgagattgagaaacatccc
caagttagtcaaaatattgggatagacttaggcataaaatcttatctcgttactagtgat
ggggaagttgtagaaaatccaaaatattacagaactcaaactcgtaagttaggcaaggca
cataagaaactatcccgcagtgtaagaggtagtagtaatcgagtcaaagcgaaaatcaag
ctggctcgtacatactcacgaattaccaatctcagagatgactttctgcataaattgtca
actcgtttaatcaaagaaaacagcattatctgtattgaggatttacgagttgccaatatg
gtcaaaaaccataaattagccctgagtatttcagacgctagctggtcaaaatttgtcgcc
atgcttgaatacaaagctctgtggcatgacagaattgtgcagaaggtcgggacattttat
ccatcatctcagacttgtaactgctgcggttttgtaaacccattagttaaagatttaaat
ctgcgcgaatggtcttgctctagttgcaatagctataatttgagggataaaaacgcagca
cttaacatattaagcgaaggtttgagattattaaccgccgtcggtacgccggaggttata
aaaagcgcctgtggaggaattgtaagtcctgaactaattcaggcagagttcgttgaagca
ggaatcacgcgactttcagtcgtgtga
DBGET
integrated database retrieval system
