Nostoc edaphicum: HUN01_08150
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Entry
HUN01_08150 CDS
T07001
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ned
Nostoc edaphicum
Pathway
ned03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUN01_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ned03021
]
HUN01_08150
03400 DNA repair and recombination proteins [BR:
ned03400
]
HUN01_08150
Enzymes [BR:
ned01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUN01_08150
Transcription machinery [BR:
ned03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUN01_08150
DNA repair and recombination proteins [BR:
ned03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUN01_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
ANM3_zf-C2H2
Motif
Other DBs
NCBI-ProteinID:
QMS87551
UniProt:
A0A7D7LCI9
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All DBs
Position
1310020..1311897
Genome browser
AA seq
625 aa
AA seq
DB search
MRPAQTNQFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLSAGNAETLSYKQLLSEDQWLEIEDQIYSEDSV
LQGVEVGIGAEALLRLLADINLEQEAESLREEIGNAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDPSVWDVLE
EVIEGHPVMLNRAPTLHRLGIQSFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIITPSQDMVLGAYYLTAENPGATKGAGNYFSSLED
VIMAFQQDQIDLHAYIYVRFDGEIESDQPDTEPVKVTENEDGTRTLLYKFRRVRQDAKGN
VLSQYIYTTPGRVIYNNAIQEALAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagacctgcccaaactaatcagtttgactacgtaaaaatcggcttggcttcccccgaa
cgcattcggcagtggggcgaaagaacattgcctaatggtcaagtagtcggtgaagttacc
aagccagaaacgattaattaccgaactctcaagccagaaatggatggcttattttgtgag
cgcatctttggcccagcgaaagattgggaatgccattgtggtaagtataaaagagttcgt
catagaggtattgtctgtgagcgctgtggggtagaagtcaccgagtcacgggtgcgtcgc
caccgtatgggctatattaaactcgccgcaccagtagctcacgtttggtatctcaaaggc
attcctagctatatttccatcctgttggatatgcccttgcgggatgtcgagcagattgtc
tatttcaactcttatgttgtcctgagtgcaggtaatgccgaaactttaagttacaaacaa
cttctgagtgaagaccagtggttggaaatagaagaccaaatttatagcgaagattctgtg
ctgcaaggcgtagaggtaggtattggtgctgaagcgctgttgcgtttgcttgccgatatc
aatttggaacaagaagccgaaagcctacgcgaagaaattggcaacgctaagggacaaaag
agagccaagctaattaagcgactgcgggtgattgataactttatcgccactggttctaaa
ccagagtggatggtaatggcagttattcccgtaattccgcccgacttgcgcccaatggtg
caactagatggcggacgctttgccaccagcgatttgaatgatttgtatcggcgggtaatt
aaccgtaacaatcgtttggcacgcttacaagaaattttagcaccagagattattgtgcgg
aacgaaaagcggatgctgcaagaagcagtggatgctttgattgacaatggccgtcgggga
cgcactgtagtaggggcaaataaccgaccactgaaatctttgtccgacattattgagggt
aagcaaggacgtttccgacaaaacttgttaggtaaacgggttgactactctggacgttcg
gtaattgtggtcgggccaaagctgaaaattcaccagtgcggtttgcctagagaaatggcg
attgagctatttcagccatttgtaattaaccgcctgattcgtagcgggatggtaaataac
atcaaagctgcgaaaaagctgatatcccgcaatgatcccagtgtttgggatgtgctggaa
gaggtgattgaaggacaccctgtaatgctaaaccgggcaccaacattgcaccgtttgggt
attcagtcttttgaaccgattttagtagaaggtagagcaattcaactgcatcctctggtg
tgtccagcgtttaacgccgactttgacggcgaccaaatggcggtacacgtccctctgtcg
ttagaaagtcaagcggaagcgcggttgttgatgttggcttctaacaatattttgtcacca
gccacaggtaaaccgatcatcacgcctagccaagatatggtgttgggagcctattattta
acagcagaaaatcccggtgcgacaaaaggggcaggaaattacttttcttcgctagaggat
gtaattatggctttccagcaagatcaaattgacttgcacgcctatatttacgtaaggttt
gacggcgaaatagaatcagaccagccggatacagaacccgtgaaagtgacggaaaacgag
gatggtactcgcacattactctataagttccgtcgagtcagacaagacgctaagggtaat
gtactttcacagtatatatacacaactcctggccgcgttatttacaacaatgccattcag
gaagcactagcaagttag
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