Nostoc edaphicum: HUN01_09060
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Entry
HUN01_09060 CDS
T07001
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ned03400
]
HUN01_09060
DNA repair and recombination proteins [BR:
ned03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUN01_09060
Archaeal homologous recombinant proteins
HUN01_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
Filament
ABC_tran
DUF5408
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QMS87723
UniProt:
A0A7D7QRB0
LinkDB
All DBs
Position
complement(1519017..1522043)
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFGGLHTACICGSNGAGKSSLLEAITWAIWGESRATVEDDV
IYSGAKEVRVDFTFQSNQQKYRVIRTRIRGGTSVLEFQIEIPSGFRSLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILAELLKLNQYDDLEERAKESSRQF
KAQAVELERSLESIKTQLQQRETTQAQRVELEAELNQLQQVQAFDNIQLQSLQVVQHQRQ
SWEQQLNFVKQQYQNLTQDCDRLQQEQSAIGSQLSDLEQILHQEAEIKAGYAQYQSLQSQ
EEAFAVKFEEYTRAQQNRQQKQQQLTKQIHEIERQLQQAQAQLEALQQQERDIQQTLTKS
GEVEAALSQLAAARHHVARLDQLQMQVTPLLQQRATLQSQLDRTHAGLVARLEQLQSTEN
QLQRQHRRQPQLQQAVMDVAIQIEELDKKRVYLQRVQEKGQERRHFIERLQAHQRDYEKL
LGELEQKLQMLQNPEALCPLCERPLDEHHWSRVVEKTQAELEDTQGQFWVVREQMAVSDR
EIQVLRQEYREISQQLAGYDGLREQRGQLAAQLEATTDVQQQLQQIAAEKQHLERSLQAG
DYAPDKQAELRQLDQYLQQANYNEQDHALARSEVERWRWAEIKQGQIKDATKRQAQLLAR
KPELQAQIAQLQTRIQQDQTDSECAKQIAALERHITEIGYSSEQHNNLRMAVKKAQSWHL
RYQQLLSAQQQYPQLQTRLQELEDSKSARLTERQKLGGQIESIIQQLQATANPSAQIQAL
EQQLAIRRRQLDEQIAKLGRLEQLAHQLETLQIQYEQQQQQLQSCKQEYRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSGNQFHVQFITQKAGRSAKSTKKNAKLIDTLDI
LIADSRGTRSYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIVDEGFGTQDAEGCD
RLIAAINAIASDFACILTVTHMPHLKEAFQARIEVNKTQEGSQLSLSI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtacaacttatcctcaaaaactttcttagttaccgtgatgcaactttagat
tttggcggtttgcatacggcttgtatttgtggttccaatggtgcgggtaaatcttctctt
ttagaagcaatcacttgggcgatttggggtgaaagccgtgccaccgttgaagatgatgtc
atctattctggtgctaaagaagttcgggttgattttacttttcaaagtaaccagcaaaaa
tatcgggtgattcgtacccgaattcggggaggtactagcgtcctcgaatttcaaatagaa
ataccatctgggtttcgctcactcactggcaaaggggtaagagcaacccaagatttgatt
ttagaacatatcaagctcgattatgatacttttattaattctgcctacttacgtcaaggt
cgtgcagatgaatttatgctcaagcgtcccacggaacgcaaagaaattttagcggagttg
ttaaaactcaatcagtatgatgatttggaagaacgtgctaaggaatcttctcgtcagttc
aaagcacaggcagtagagttagagcgttctttggagtcgataaaaactcagctgcaacaa
cgtgagacaactcaagcgcaaagagtggagttagaagccgaacttaaccaactgcaacag
gtacaggcttttgataatattcaattacaaagtttgcaagttgtccagcaccagcgccaa
agttgggaacaacaactcaattttgtaaagcagcaataccaaaatcttacccaagattgc
gatcgcctccaacaagaacaatcagctattggctctcagctatcagatttagaacaaata
ttacaccaagaagctgagattaaagctggatacgcccaatatcaaagtctccaatctcaa
gaagaagcttttgctgtcaaatttgaagaatacacccgcgcccaacagaatcgccaacaa
aagcaacaacagcttactaaacaaattcacgaaattgaacggcaactgcaacaagcccaa
gcgcagttagaagctttgcagcaacaagagcgagatattcagcaaactctgactaaatca
ggtgaagtagaagctgctttgtcacaactagccgcagcccgtcaccatgttgctcgtcta
gatcaactgcaaatgcaagttactccgttgttgcaacaacgagcaactttacaaagccaa
ctcgatcgcactcatgctggtttagtagcgcgactcgaacaactccaaagtactgagaat
caattgcaacgccagcaccgccgccaaccgcaactgcaacaagcggtaatggatgtggca
atccaaattgaggaactggataaaaagcgggtttatctgcaacgagtccaagaaaaaggg
caagaaaggcggcactttatcgaacgtttgcaagctcatcaacgggactatgaaaaacta
ctgggagaattagagcagaaattgcaaatgctccaaaatcctgaagcactttgtccatta
tgtgagcgtcctttagacgaacatcactggagtcgggtagtggaaaaaacccaggctgag
ttggaggatactcaagggcagttttgggtagtgcgagaacaaatggctgtgtctgaccga
gaaattcaagtacttaggcaggaatatcgggaaatttcccaacagttggcgggctacgat
ggtttacgcgaacagcggggacagttggcagcacagttagaagctacaaccgatgtgcaa
caacagttacagcaaattgctgccgaaaaacagcatttagagcgatcgctccaagctggt
gattacgctcctgataaacaagccgaactccggcagctagaccaatatctccaacaagct
aattataatgaacaagaccatgccctcgcccggagcgaagttgagcggtggcgatgggca
gaaattaaacaagggcagattaaagatgcaactaagcgacaagcgcaactattagcccga
aaaccagaactccaggctcaaattgcccaattacaaaccagaatccagcaggatcagact
gattctgaatgtgctaaacaaatcgcggctcttgagcgtcacattaccgaaattggctat
agttccgagcagcacaacaatctgcgtatggctgtaaagaaagctcaatcttggcattta
cgatatcaacaactactatcagcccagcaacagtatccgcaactccagacgagattgcaa
gagttagaggactccaaaagtgccagattgacagagcggcaaaagctgggcggacaaatc
gaaagcattatccagcaactacaagcaacagctaacccatctgcacaaattcaagctcta
gagcagcagttagcaatccgcagacggcaactcgatgagcaaattgccaagttagggcgt
ttagaacagctggcgcatcaactggaaacgctgcaaattcagtatgaacaacagcagcag
caattacaatcttgcaaacaggaatatcgtgtttatcaggaattagcgcaagcttttggt
aaaaatggcatccaagcactgatgattgagaatgtgttaccgcaactggaagctgaaaca
aatcaactactttcgcggctgagtgggaatcagtttcatgtacaatttattactcaaaaa
gctggacgaagtgctaaatcaaccaagaaaaatgccaagttaatagacaccctagatatt
ttaatcgccgattctagaggaacgcgatcttatgaaacttactctggtggggaagccttt
agaattaactttgccatccgtttggctttggcgaaattattagcgcaacgggcgggggcg
gcgttgcaattgttgattgtggatgagggttttggtacccaggatgccgaaggatgcgat
cgcttgattgcagcgattaatgcgatcgcctccgattttgcctgtatcctcactgtcact
catatgccccatctcaaagaagctttccaagccaggattgaagtaaataaaactcaggaa
ggttcgcagttgagtttgtcaatttaa
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