Nostoc edaphicum: HUN01_10250
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Entry
HUN01_10250 CDS
T07001
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
ned
Nostoc edaphicum
Pathway
ned02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUN01_10250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ned02022
]
HUN01_10250
Two-component system [BR:
ned02022
]
NarL family
LiaS-LiaR (cell wall stress response)
HUN01_10250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_38
HTH_40
HTH_23
HTH_24
HTH_7
HTH_29
HTH_3
HTH_28
LexA_DNA_bind
HTH_11
Sigma70_r4
LRR_R13L1-DRL21
HTH_30
HTH_20
Sigma70_ECF
Peripla_BP_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QMS87952
UniProt:
A0A7D7LDP5
LinkDB
All DBs
Position
complement(1820896..1821507)
Genome browser
AA seq
203 aa
AA seq
DB search
MTVDDHEILRGGIKFLLLAFDDMELVGEARNGDEAVDLCEQLQPDVVLMDLMMVGMNGAE
ATKAIRKKYPEIQVLILTSFFANDLVQQAMQAGAIGYLLKGISIDELADAIRSAAIGRSM
LAAEIIQALLQPSKPSSQPVYELSKRQEEVLALLALGLSNDAIAQRMKLSPSTIRHHVSQ
VLNKLGVTNRTEAATTAVRVGCV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
attactgttgacgatcatgaaatcttgcggggaggtattaaatttctcttgctggcattt
gatgacatggaattagtgggtgaagcgcgtaatggagatgaagcagtagatttgtgcgaa
cagttgcaaccagatgtagtgctgatggatttgatgatggtggggatgaatggggcagaa
gcaaccaaagctatccgcaaaaaatatccagaaattcaagttttaattttgacgagtttt
tttgcgaatgacttggtacagcaagcaatgcaagccggagctattggctacctgctcaag
ggtatctcgattgatgagttggcggatgccatccgatctgctgcgatcggtcgttctatg
ttggcagcagagattattcaggctttgctgcaaccgagcaaaccatcatctcaacctgtt
tacgaactgagcaagcgacaggaagaggtcttagcactgctggctttaggattaagtaat
gacgcgatcgctcaacgaatgaaattgagtccttctaccatcaggcatcatgtcagccaa
gtactaaataaattaggagtaacaaaccgcactgaggctgcaactacagcagtgcgagtc
ggatgtgtttag
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