Nostoc edaphicum: HUN01_11435
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Entry
HUN01_11435 CDS
T07001
Name
(GenBank) deoxyribodipyrimidine photo-lyase, 8-HDF type
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ned03400
]
HUN01_11435
Enzymes [BR:
ned01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HUN01_11435
DNA repair and recombination proteins [BR:
ned03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HUN01_11435
Prokaryotic type
HUN01_11435
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QMS88175
UniProt:
A0A7D7Q9Q7
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All DBs
Position
2091128..2092573
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AA seq
481 aa
AA seq
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MSDLILFWHRRDLRISDNTGLAAAKRRSPKVVGVFCLDPHILERDDVAPVRVTYMIGCLQ
KLQERYAKAGSELLILHADPVQAIPALAEALTAKAVFWNWDVEPYSQERDRTIINALKEK
GIEFLNQNWDQILNSPDEIRTGGNQPYTVYTPFWKNWITKPKAQPLETLQNVEGLTEAEQ
KIAKLAGAIALPSAKDLGFIWDEQLIIPPGEAAAQERLEEFTAKAITEYQEQRNFPAVDG
TSQLSAALKFGVIGIRTVWQATIEALENSRSEETAVNIRTWQQELAWREFYQHAMYNFPE
LADGAFRETFKNFPWETNEEHFQAWCEGRTGYPIVDAAMRQLNESGWMHNRCRMIVASFL
TKDLLINPQLGEKYFMQKLIDGDLSANNGGWQWSASSGMDPKPVRIFNPASQTQKFDPEG
EYIRQWVSELRSVDTEYLVTGKIPPLERHAVGYPDPIVDHKIQQNQFKLRYQQQKNISGG
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttaattctgttttggcatcggcgcgatttacgcatttctgacaatacggga
ctggctgcggcaaaacggcggagtccgaaagtggtgggcgtgttttgccttgatccgcat
attttagaacgggatgatgttgctcctgtgagagtaacttatatgattggctgcttgcag
aaactccaagagcgatatgctaaagctggcagtgagttattaatcctccatgctgatcct
gtacaagcgataccagctttagcagaggctttaacagctaaagctgttttttggaattgg
gatgtcgaaccttattcacaagaacgcgatcgcaccatcataaatgccctcaaagaaaaa
ggcattgagtttctgaaccaaaactgggatcaaatcctcaactccccagatgagatccgc
acgggtggtaatcaaccttatacggtttacacccccttctggaaaaattggattactaaa
ccgaaggctcaaccattagaaacactgcaaaatgttgagggtttaacagaagctgaacag
aaaattgcaaaacttgcaggagcgatcgcattaccttcagcaaaagatttaggatttatc
tgggatgaacaattgattattccaccaggagaagcggcggcacaagaacggctagaagaa
tttactgctaaagctattactgaataccaagaacagcgaaattttcccgcagttgatgga
acatcacaactgagtgcagctttgaaatttggcgtaattggcattcgcactgtttggcaa
gccaccatagaagcactagaaaacagccgcagtgaagaaacagcagttaatatccgcaca
tggcaacaggaattagcttggcgggagttttatcaacatgcaatgtataacttccccgaa
ttagctgatggtgctttccgtgaaacctttaagaactttccttgggaaactaacgaagaa
catttccaagcttggtgtgaaggaagaactggctacccaattgtggatgcagcaatgcgc
cagttaaacgaaagtggctggatgcacaaccgttgtcgaatgattgttgctagtttcctc
accaaagacttgctaattaatccccaattgggagaaaaatactttatgcaaaagctgatt
gatggtgatttatctgctaataatggcggttggcaatggagtgcttctagcggtatggac
cctaaacctgtgcggatttttaacccagctagtcaaacgcaaaaatttgatccagagggg
gaatatattcggcaatgggtatcagaattgcggtctgtagataccgaatatttagttact
ggtaaaattccacctttagaacgtcatgctgttggctatcccgacccaattgtggatcat
aaaatccaacaaaaccagtttaaactacgttatcaacaacaaaaaaacattagtggtggt
gagtaa
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