Nostoc edaphicum: HUN01_12810
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Entry
HUN01_12810 CDS
T07001
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ned
Nostoc edaphicum
Pathway
ned03420
Nucleotide excision repair
ned03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUN01_12810 (pcrA)
03430 Mismatch repair
HUN01_12810 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ned03400
]
HUN01_12810 (pcrA)
Enzymes [BR:
ned01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUN01_12810 (pcrA)
DNA repair and recombination proteins [BR:
ned03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUN01_12810 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HUN01_12810 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
AAA_30
AAA_11
GA
DUF247
ResIII
Rv2949c-like
AAA_22
SinI
ARM_LIN_2nd
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QMS88432
UniProt:
A0A7D7LEA5
LinkDB
All DBs
Position
2486214..2488538
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AA seq
774 aa
AA seq
DB search
MTTTIDFLSHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLILKHRVDPENILA
VTFTNKAAREMKDRVQRLFAEQLAMKQHGQRLDLLTEYQQTQLRSQVYKSTIKDLWCGTF
HSLFSRILRFDIEKYVDEKGRRWNRNFSIFDESDVMTLIKEIVNKQLNLDDKKFDARSVR
YAISNAKNQGLSPQEFEQDQPNYRGRVIAQVYNLYQDKLAQNNALDFDDLILVPTILFQQ
NEQVLGYWHRKFCHILVDEYQDTNRTQYQLIHLLVTNGETRKSEWEWQNRSVFVVGDADQ
SIYSFRMADFTILLGFQEDFGDGLVDDDTQTMVKLEENYRSCENILQAANELIENNTQRI
DKILKATRGPGEQITCHKADEELAEAAFVINQIRTLENQNPELNWGSFAILYRTNAQSRP
FEQLLVEKQIPYTIVGGIKFYDRKEIKDVIAYLRAVANPSDTVSLLRVINTPRRGIGKAT
IDALENASNELGMTLWEILIDETSVNTLAGRSAKAVNNFAKMIQSWQEQIATVSVPELVN
IVLEDSGYIQDLQSKDTDENEERIRNVQELYNAAIEFQEEEENEDVSLQNFLSDKAVNPD
DKLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLGDPASLEEERRLCYVGIT
RAQERLFLSHARERRLYGSREPAMRSQFLDELPEELLSTKRASRQSYTKSASTSNGKQDS
TQNWQVGDRVLHKTFGLGEITHVFGTGNKMSVAIKFASLGQKIVDPRVAQLQKV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccatcgactttctcagtcaccttaaccctagccaacgtcaagccgtcgaa
cactactgcggcccgttgctagttgttgctggcgcgggttccggtaaaacacgagcgctg
acttatcgcattgcgaatctgattctgaaacaccgtgttgatccagaaaatatcctggcg
gttacttttaccaacaaagctgcgcgagaaatgaaagaccgggttcaacgcctgtttgca
gaacaactggcgatgaaacaacacggtcagcgattggatttgttgacagaatatcaacaa
acccaactgcgatcgcaagtttacaaaagtactatcaaagatttgtggtgtggcactttc
cacagtctattttctcgtattctccgttttgatattgaaaaatacgtagacgaaaaagga
cggcgttggaatcgcaatttctctatttttgatgaatcagatgtgatgactctgattaaa
gaaattgttaataaacagctaaatttagacgataagaagtttgacgcccgctctgttcgc
tacgctattagtaacgcgaaaaatcaaggtttatcgccccaagaatttgagcaagaccaa
cccaattatcgcggacgggtaattgcccaagtctacaatttatatcaagataaattagcc
caaaacaacgctctcgactttgatgatcttattcttgtaccgactatattatttcagcaa
aatgagcaagtattgggttactggcatcgtaaattttgccatatccttgtagatgaatat
caggatactaaccgcactcagtatcaactcatccacttattggtgactaacggcgaaacc
agaaagagcgaatgggaatggcaaaatcgctcagttttcgttgttggcgatgcagaccaa
tcaatttatagctttcggatggcagatttcaccatcttacttggatttcaggaagatttt
ggtgatggtttagtagatgatgacactcaaacgatggttaagctggaagaaaactatcgt
tcttgtgaaaatattctgcaagcggcgaatgaactaattgaaaataacacccaacggatt
gataaaatcctcaaagcgacgcgggggccgggtgagcagattacttgtcacaaagccgat
gaggaacttgcagaagcggcatttgtgattaatcaaattcgtactttagaaaaccaaaat
ccagagttgaactggggtagttttgccatactttatcgcacaaacgcccaatctcgtcct
tttgaacaattgttagtagaaaaacaaattccttacacgattgtaggaggaattaagttt
tacgatcgcaaagaaatcaaagatgtcatcgcgtatttaagagcggtcgctaacccatct
gatacagtaagtttattacgagttattaatactcctcggcggggaattggtaaagcaacg
attgatgctttagaaaatgcctctaatgaattagggatgactctgtgggaaattctcatc
gacgaaacctcagttaatacattagctggaaggtctgcgaaagcggtaaataactttgct
aaaatgattcagagttggcaagaacaaattgcaacagtttccgttcctgagcttgtaaac
atagtgctggaagactctggttatatccaagatttgcaaagcaaagatacagatgagaat
gaagaacggataagaaatgttcaggaactttacaatgctgcaatcgaatttcaagaagaa
gaagaaaacgaagatgtttccttacaaaactttcttagcgacaaagccgtaaatcctgat
gataaattaaaagaagggcaaacagccgtttctttaatgactttgcacgcttccaaaggt
ttagaatttcccgtggtatttttggtgggattggaacaagggctatttcccggttaccgt
tcgctgggcgatcccgcatctttggaagaagaacgccgcttgtgttatgtggggattact
cgcgcccaagaaaggttatttttatcacacgcgcgggaacgtcgtttgtatggttctcgt
gaacctgcgatgcgatcgcaatttctcgacgaattaccagaagagttattatctaccaaa
cgcgcaagccgtcaaagttataccaaaagcgcttctacttctaatggtaaacaagactca
acacagaattggcaagtgggcgatagagtattacataaaacttttgggcttggtgaaatc
acgcatgtatttggaacaggtaataaaatgtctgtagcaattaaatttgccagcttgggg
cagaaaattgttgatccaagagtagcacagttgcaaaaagtttga
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