Nostoc edaphicum: HUN01_13045
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Entry
HUN01_13045 CDS
T07001
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HUN01_13045 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ned03019
]
HUN01_13045 (rnc)
03009 Ribosome biogenesis [BR:
ned03009
]
HUN01_13045 (rnc)
03036 Chromosome and associated proteins [BR:
ned03036
]
HUN01_13045 (rnc)
Enzymes [BR:
ned01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HUN01_13045 (rnc)
Messenger RNA biogenesis [BR:
ned03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUN01_13045 (rnc)
Ribosome biogenesis [BR:
ned03009
]
Eukaryotic type
90S particles
RNase
HUN01_13045 (rnc)
Prokaryotic type
rRNA processing factors
HUN01_13045 (rnc)
Chromosome and associated proteins [BR:
ned03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HUN01_13045 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QMS88477
UniProt:
A0A7D7Q9Z1
LinkDB
All DBs
Position
complement(2539637..2540356)
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AA seq
239 aa
AA seq
DB search
MSLAYPRRQRQLESLVQKLGLSLEAPIKWELLDLALTHPTVSDSANYEQLEFVGDAVVRL
VSAVVLWENYPDCPVGDFAAIRSVLVSDRILAQLARTYGLELYLLVAGSATADKVGLESR
LADAFEAVLGALYLSTQNLELIRSWLDPHFLQLATEIRLDPARLNYKAALQEWTQAQFKV
LPEYRVVEVSQPHRNHERFVAEVWLHGTKLGFGKGRSIKTAEQAAAKVAFLAISNPENP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgcctatccacgccgtcaacggcaacttgaaagtttagtccaaaaattaggt
ttgtcgctagaagcacctataaagtgggaactgctagatttagcgctcactcatcccact
gtttctgattcggcaaattatgaacagctggagtttgttggcgatgcagtggtgcgcctg
gtttcggctgttgtgttatgggaaaattatcctgattgtcccgtaggggattttgcggca
attcgttcggtattggtgagcgatcgcatcctcgcccaattggccagaacttatggttta
gagttatacttactcgttgctggcagtgctaccgctgataaagttggtctagagtcacga
ctagcagacgcttttgaagcagttctgggtgcactttatttaagtactcaaaatctagaa
ctgatccgctcttggctagatccccacttcctacaattagcaacagaaattcgccttgat
cctgccagacttaattacaaagctgctctccaagaatggactcaggcacaatttaaagtt
ttaccagagtatcgggttgtggaagttagtcaaccgcaccgtaatcatgaacgtttcgtg
gctgaagtgtggctgcacggaaccaagctaggatttggtaagggacgctcaatcaaaacc
gctgaacaagccgcagccaaggtagcttttttagcaatctctaatccggaaaacccctga
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