Nostoc edaphicum: HUN01_15680
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Entry
HUN01_15680 CDS
T07001
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ned03021
]
HUN01_15680
Transcription machinery [BR:
ned03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUN01_15680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_Tnp_ISL3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QMS88971
UniProt:
A0A7D7LEM5
LinkDB
All DBs
Position
complement(3159293..3160078)
Genome browser
AA seq
261 aa
AA seq
DB search
MAASESSLRTDGIELLHLYHQNPSIKLRNKLVQLHTGLVRKMAHKFSHQCNEPYEDLEQI
GYFGLIRAIERFDPSQGYAFSSFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKIR
KDLAMSLGRQPKDAEIASQLRVSVQEWQETKLAAQNRMPLSLDATAVNYVDCQITLGEAL
PCPRSHVLLQQEEERQQLQGAINMLEEKPRMAVEMVFLKELSRKDAAKNIGTSPMTVTRY
LQKGIQDLICYLQPQVMPTGS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagtgagtcctctttacgaactgatggtatagaattattacacttgtaccac
cagaatccttctattaaacttcgtaataaacttgtacagttacatactggcttagtacga
aagatggctcataaattcagccatcaatgtaatgaaccttatgaagatttagaacaaatc
ggttattttggtttaattagggcaattgagcgtttcgaccctagccaaggatatgctttt
agttcctttgcagtgccatacattcgcggtgagatgctgcactttttgcgcgatcgcagt
actctattaaaaattccccgtcgttggcaagaattgtacaatgaagggcaaaagattcgc
aaggacttggcaatgtctttaggtcgccagcccaaggatgctgaaattgccagccaactt
cgggtatctgtgcaagaatggcaagaaaccaaattagcggctcaaaatcggatgcctttg
agtttagatgcaaccgcagttaactatgttgattgccaaataaccttgggtgaagcactt
ccttgtcctcgttctcatgtacttctgcaacaagaagaagaacgccaacaactccaaggc
gcaatcaatatgttggaagaaaagccccgcatggcagttgaaatggtatttttgaaggaa
ctttctcgcaaggatgctgctaaaaacattggcactagtccaatgactgtaactcgttat
ctgcaaaagggaattcaagatttgatttgctatttgcaaccacaggtaatgcccactgga
tcttga
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