Nostoc edaphicum: HUN01_17720
Help
Entry
HUN01_17720 CDS
T07001
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ned03021
]
HUN01_17720
Transcription machinery [BR:
ned03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUN01_17720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_24
HTH_23
KORA
HTH_17
Sigma70_ECF
HTH_Tnp_ISL3
HTH_8
HTH_Tnp_4
GerE
MarR_2
HTH_11
HTH_31
HTH_AsnC-type
Xre-like-HTH
Sigma54_DBD
HTH_28
HTH_37
AbiEi_4
Trp_repressor
HTH_30
DUF1492
LacI
Motif
Other DBs
NCBI-ProteinID:
QMS89329
UniProt:
A0A7D7LF04
LinkDB
All DBs
Position
complement(3613436..3614212)
Genome browser
AA seq
258 aa
AA seq
DB search
MPTTVTTELKHEIWQLLREYQQSPSENIRNQLVKLNFGLVRKEAHYWTNQCHETYDDLLQ
VGCLGLIRAIERFELSKGHAFSSYALPYIRGEIQHYLRDKGVTVRIPRRWLALQQQAIGI
SRSWREKHNRQPTDSELAAALEISPNEWQEIKLAWVNRAPLSLDVPIQDGEEGSTCLGEL
VPDPHYRSFQLAQEDQLRLQQALVQLEKRTRDVLECVFLQDLTQKQVAEHLGISVVTVSR
RVKKGLDLMKELMGVAED
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacagtcaccactgaactaaaacacgaaatttggcagttgttgcgagaatat
cagcaatctccgtcagaaaatatccgtaatcaactggtaaaactcaattttggacttgtg
agaaaagaagctcactactggacaaatcaatgtcatgaaacctacgatgatttgctccag
gttggatgtttgggtttaatcagagctattgaaagatttgaactttccaagggacatgcc
ttcagttcctatgctcttccttatattcggggtgaaattcaacactatcttcgagataaa
ggcgtcaccgtgcgaattcctcggagatggttagcactccaacagcaagcaataggaata
tcacgttcttggcgtgaaaaacataatcgccaaccaaccgactcggaattagcagcagca
ctagaaatttctccaaatgaatggcaagaaattaaattagcatgggtcaatcgcgctccc
ttgagtctcgatgtgccaatccaagatggagaagaaggttctacctgcttgggagaattg
gttccagatcctcactatcgcagctttcaactggcacaagaagaccaacttcgcttacaa
caagcattggttcagctagaaaaacgcacccgcgatgtgttggaatgtgtgtttttgcaa
gatttaacccaaaaacaagttgcagaacatctgggtatcagtgtagttacggtttcccgt
agagtcaagaaaggcttggatttgatgaaagagcttatgggtgtggctgaggactaa
DBGET
integrated database retrieval system
