Nostoc edaphicum: HUN01_23240
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Entry
HUN01_23240 CDS
T07001
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ned
Nostoc edaphicum
Pathway
ned03420
Nucleotide excision repair
ned03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUN01_23240
03430 Mismatch repair
HUN01_23240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ned03400
]
HUN01_23240
Enzymes [BR:
ned01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUN01_23240
DNA repair and recombination proteins [BR:
ned03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUN01_23240
MMR (mismatch excision repair)
Other MMR factors
HUN01_23240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DEAD
AAA_30
DUF3138
Motif
Other DBs
NCBI-ProteinID:
QMS90354
UniProt:
A0A7D7LF56
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All DBs
Position
4868716..4871166
Genome browser
AA seq
816 aa
AA seq
DB search
MSDSKFTAPVAQELLHSQLLERSLVPSLQEKILEIRNSLRPGQQQMADWQSGPLAISAVP
GAGKSTGMAAAAAIAIARQYERSSSRRQLVVVTFTRSAAANIKAKIRKFLRDDLSLPQMG
FFVYTLHGLALNIASRHSDLSGLQLENVTLITPTQSHRFIRTAVEQWIGNNQDRYLRLLE
GHQFDGEETERLRRQSVLRTEVLPELANTVIHEAKSSGISPELLREWSQQTTDEYAILSV
AAGLYEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQT
QLLEILASDGGDEAGGRGQGAGGRERIITPQSSVISHQSILNLVRVGDPNQAINSTFTPA
DPIYFRQFCEECDRIERLATMDQAGRSTRIIIEAANFALKWINNQWLAKTNNGQQIPDNR
QVPFRLQTIRPVNAGDPQTNANPAPVGRGLELYTPRDIHHTVELLSQRVIELFGEDPTKN
SAAILVRENRQGRWLGEALAPVCKEHNITLYDVGERDRRSHVPQEILALLQFCDRPHSPD
YLKAALEALVQRQLIPTQDLNALASLPEEFLYPSPLAAPQSETVQKAARLCRNLLRARLE
LPLYQLISFLALTLNYDQAELATADKLAERVNQQIAGNSSMSGMLSALSEIVSSERFEPV
ETEDSEERYTRRGQLTIITMHKAKGLDWDYVFLPFLHENLIPGRFWVPPQSQFLGDFTLS
EVARAQIRATLHEESTIPDVSQAWEVAKNLKTSEEYRLLYVAMTRAKLLLWMSAAQKAPF
TWSKPDNLQEQAPCPVFPALKRQFPECVMNLAAMIK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctaaatttactgctcctgtggctcaagaattactccactcacaattgttg
gagcgatcgcttgttccttctttacaagagaagattctcgaaatccgcaacagtttacgc
ccaggacagcagcaaatggctgactggcaatctggccctttggcgatttccgccgttcct
ggtgcaggaaaatctacgggtatggcggcggcggcagcgatcgcgatcgcacgacagtat
gaacgttcatcctcacgccgtcaattggtagtcgttacttttactcgctctgctgctgcc
aatattaaagccaagattcgtaaattcttacgagatgatttatctttaccccagatgggc
ttttttgtctataccttacatggtctagcgttaaacattgccagccgccattctgatttg
tcgggtttgcagttagaaaatgtcacattaattacaccaacccaaagtcatcgctttatc
agaactgctgtagaacaatggattggaaataatcaagatagatatttgcggttattagaa
ggtcatcaatttgacggagaagagacagaaaggttacgtcgtcaatcggtgctgcgaaca
gaagtcttgccagaattagcgaatacggtaattcatgaagccaaaagttctggaatatcg
ccagaattgttgcgggagtggagtcaacaaaccacagacgaatatgcaattttgagtgta
gcggcgggattgtatgagcaatatcaaaacttaatgcgatcgcgtgacttcattgattac
gacgatatgattttagccgcactgcgcgttttagaaaatgacagcgcccgtcgcatcgag
caaaaccaagtattcgccgtctttgaagacgaagcccaagattctagcccgcttcaaacg
cagttattagaaattttggcaagtgatgggggagatgaggcagggggcagggggcagggg
gcagggggcagggagagaataataactcctcaatcatcagtcatcagtcatcagtcaata
ctcaacttagtacgcgtcggtgatcccaaccaggcgattaactctacctttactccagcc
gatccgatttattttcgccaattttgcgaagagtgcgatcgcattgagcgattggcaacg
atggatcaagctggtcgcagtactagaattatcattgaagcggctaactttgccctcaag
tggatcaataatcagtggttagcaaaaaccaataacggacaacagattcctgacaaccga
caagtcccatttcgcttacagacaattcgccctgttaatgctggtgatccgcaaactaac
gccaaccccgcaccagtaggacgaggactagaactttatacaccgcgtgatattcatcac
accgttgaattgttatctcaaagggtgattgagttatttggcgaagacccaacaaaaaat
agtgcagcgattttagtcagagaaaatcgccaaggacgctggctaggagaggctttagca
cctgtgtgcaaagagcataatattacactttacgatgtgggagaacgtgatcgccgttcc
catgtcccccaagaaattttggcattattgcaattttgcgatcgcccccactcccccgat
tatctcaaagccgccctagaagctttagtacagcgtcagttaattcctacccaagacctc
aacgcccttgctagtctgccagaagaatttttgtatcctagtccactagcagcaccccaa
tcagaaacagtacaaaaagctgcccgtttgtgtcgtaatttacttcgcgctcgcttagaa
ctgcctctttatcagctaatttcctttctcgccttgaccttaaattacgaccaagcagaa
ttggcaactgctgacaaactcgcagaacgggttaaccagcagatagctggcaatagttca
atgagtgggatgctttcagccttaagtgaaatcgtcagttctgaacggtttgaaccagtg
gaaaccgaggattcggaagaacgttacactcgtcgcggtcaactgacgattattaccatg
cacaaagccaaagggctggattgggactatgtgtttcttccctttctccatgaaaacttg
attcctggcagattttgggttcctccccaaagccaattcttaggcgactttaccttatca
gaagtagcccgcgctcaaattcgcgctactctccacgaagaatctaccataccggacgtt
agtcaagcatgggaggtggcaaagaatttgaaaacatctgaagaatatcgtttactttat
gttgccatgacacgagcgaaacttctgttgtggatgtctgcggcgcagaaagcgcccttt
acttggagtaaaccagataatttacaagaacaagcgccttgtcccgtgtttccggcatta
aaacgccagtttcctgaatgtgtgatgaatttagcggcaatgatcaaatag
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