Nostoc edaphicum: HUN01_23620
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Entry
HUN01_23620 CDS
T07001
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ned
Nostoc edaphicum
Pathway
ned02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUN01_23620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ned02000
]
HUN01_23620
Transporters [BR:
ned02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HUN01_23620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QMS90423
UniProt:
A0A7D7QV38
LinkDB
All DBs
Position
complement(4954443..4955600)
Genome browser
AA seq
385 aa
AA seq
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MDRRYFLLSTSTLALSQLLFGCGGNKQTQLKVQLLKGSIPGQVVNQFHNGLQQQVQLKFS
PVEQLQDLFQQLQNWQQKPKSTDEQGWSRFIPFRQGQKAAEADLVTLGDYWLKAAIEQKL
IQPLQEVGGNQLKQWSALDERWKKLVTRNDQGNLDTQGKVWGAPYRWGSTVIVYNRDKLR
NLGWIPKDWSDLWRDEMQQHISLLNQPREVIGLVLKKLGKSYNTENLDQVPDLEKELQTL
NQQVKFYSSNNYLEPLIMGDTWLAVGWSSDVLPALARYPQLGAVIPQSGTAMWADLWVRP
AGITKDTLSDQWIDFCWKPSTAKQISVLTKSNSPISTNIVTSDIQEPLLSILQSDRNIFN
KSEFLLPLPPSVIKQYESLFAKIKV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatcgacggtattttttgttaagtacaagtacgctggcactttcacaactgcttttt
ggctgtggtggaaacaagcagacacaactaaaagtgcagttattaaaaggttctatacct
ggtcaggtggtgaatcagttccacaacggtttgcagcaacaggtgcagttaaagttttct
ccagtcgagcagttacaggatttatttcagcaattacaaaattggcagcagaaaccgaaa
agtactgatgagcagggatggagtcgctttataccctttaggcaaggtcaaaaagcagct
gaggcagacctagtgacattgggagattactggctaaaggcagctattgagcagaaattg
attcaaccactccaagaagtagggggaaaccaattaaaacagtggtctgctttagatgaa
aggtggaagaaattagtaacgcgcaacgaccaaggtaacttggatactcaagggaaggtg
tggggtgcgccttaccgctggggtagcacggtgattgtttataaccgtgacaagttgcga
aatttgggatggatacccaaagattggagtgatttatggcgagatgaaatgcagcagcac
atttccctactcaatcaaccacgagaagttattggtctggtcttaaagaagctaggaaaa
tcttataatacagagaatcttgaccaagtaccagacttggaaaaagaattacagacatta
aatcaacaggtgaaattttacagttccaataactatttggaacccctaattatgggagac
acttggctagcggttggttggtcaagcgatgtactaccagctttggcacgttatccgcaa
ctcggcgcagttatcccccagtcaggaacagcaatgtgggcagatttgtgggtacgtccg
gcaggtattactaaggatactttatcagatcaatggattgatttttgttggaaaccaagt
acagctaaacaaatttcggtgctgaccaaaagtaattcaccaatttctacaaacattgtc
acttccgatatccaagaaccattattgagcatcttacagagcgatcgcaacattttcaat
aaaagcgaatttttacttcccttacccccatcagtaataaaacaatacgagtctttattc
gccaaaattaaggtttaa
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