Nostoc edaphicum: HUN01_23985
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Entry
HUN01_23985 CDS
T07001
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ned
Nostoc edaphicum
Pathway
ned03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUN01_23985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ned03400
]
HUN01_23985
Enzymes [BR:
ned01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HUN01_23985
DNA repair and recombination proteins [BR:
ned03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUN01_23985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QMS90491
UniProt:
A0A7D7LGW2
LinkDB
All DBs
Position
complement(5032027..5032707)
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AA seq
226 aa
AA seq
DB search
MSSETQLSLFDDSSFNQRELIPTDAKIAIAPGTYSSITELTQDCDRCHRCPLGDTRTHAV
VGRGNLKAPIMVIGEAPGQNEDETGLPFVGRSGQLLEKILASVNLTTDHDVYIANINKCR
PPDNRVPTPIEVAACLPYLLEQIRLVDPKIILLTGATAVKGITGDKRGITKIRGQWLEWE
GRLCMPIFHPSYLLRNPSKERGAPKWLMWQDIQAVRAKLDEIQNNS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaaacccaactcagcctcttcgacgactcaagctttaaccaacgagaactg
attcctacagacgcgaaaattgcgatcgctccaggaacttattccagcatcacggagttg
acacaggattgcgatcgctgtcaccgttgtccattaggggacactcggactcatgcggtt
gttggacgcggtaatctcaaagccccaattatggttataggagaagcgcctggtcaaaat
gaagatgaaacgggtttaccatttgtgggcagatcagggcagttgttagagaaaattttg
gcatcagtgaatctgactactgatcatgatgtatacattgccaatatcaacaaatgtcgc
ccaccagataatagagttcccactcctatagaagtggcggcttgtttaccctacttacta
gaacaaattcgcttagttgaccccaaaataattctgttaacaggtgcaactgctgtcaaa
ggtatcactggcgataagcgagggattacgaaaattcgcggtcagtggctagagtgggaa
gggcggttatgtatgccaatttttcatccttcctacttgttgcgtaacccttctaaagaa
agaggtgcgccgaaatggttgatgtggcaggatatccaggctgtgcgtgccaagttagac
gaaatccaaaataatagctaa
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