Nostoc edaphicum: HUN01_24575
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Entry
HUN01_24575 CDS
T07001
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ned03016
]
HUN01_24575
Enzymes [BR:
ned01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HUN01_24575
Transfer RNA biogenesis [BR:
ned03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HUN01_24575
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
QMS90599
UniProt:
A0A7D7QES4
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All DBs
Position
complement(5200187..5200816)
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AA seq
209 aa
AA seq
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MTLPDFQVSDRDLSDAALEQYLESTAIAVDTETMGLLPLRDRLCLVQLCNLEGKVTAIRI
AKGQADAPNLKKLLEAANVVKVFHFARFDLATLRANLGIQVGPVFCTKIASKLARTYTNR
HGLKDVVQELEQVELDKSSQSSDWGNAASLSEAQLSYAANDVRYLISVQQKLIEMLKREE
RWEIAQECFQFLPTIVSLDLLQFKDLFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacattaccagattttcaggtgagcgatcgcgaccttagtgacgcagcccttgaacag
tatttagaatcgacggcgatcgcagttgatacagaaacgatgggattattgccgttgcgc
gatcgcttgtgtctcgtccaactgtgtaaccttgaggggaaagtgactgcaatccgcata
gccaaaggacaagcagacgctccaaacttaaaaaaactcttagaagcggcgaatgtcgta
aaagtatttcactttgctcgttttgaccttgccactttgcgagccaatctggggattcag
gttgggccggttttttgcaccaaaattgccagcaagttagcccgtacttatacaaatcgc
cacggactcaaagatgtggtgcaagaattagaacaagtggaactggataaaagctctcaa
agttctgattggggtaacgccgctagtttatctgaagctcaactaagttatgctgccaat
gatgtgcgctacttaattagtgtgcagcagaagctaatagaaatgctcaaacgagaagaa
cgttgggaaattgctcaagaatgttttcaatttctaccaactatagtttccttagatttg
ttgcaatttaaggatttgtttgaacactga
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