Nostoc edaphicum: HUN01_25055
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Entry
HUN01_25055 CDS
T07001
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ned03009
]
HUN01_25055 (rimO)
Enzymes [BR:
ned01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HUN01_25055 (rimO)
Ribosome biogenesis [BR:
ned03009
]
Prokaryotic type
ribosomal protein modification factors
HUN01_25055 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
Thioredoxin_6
AHD
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QMS90693
UniProt:
A0A7D7LDD1
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All DBs
Position
complement(5306116..5307435)
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AA seq
439 aa
AA seq
DB search
MGDKPTIAISHLGCEKNRIDTEHMLGMLVEAGYGVDTNEELADYVIVNTCSFIEAARQES
VRTLVELAEANKKIVITGCMAQHFQEQLLEELPEAVAVVGTGDYHKIVNVIERVELGERV
KQVSIEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVA
EAEQLVSQGVKEIILISQITTNYGLDIYGQPKLAELLRALGKVDIPWIRMHYAYPTGLTP
DVIAAIQETPNVLPYLDLPLQHSHPDVLRAMNRPWQGRVNDGIIDRIRTALPTAVMRTTF
IVGFPGETSEHFEHLLEFVQRHEFDHVGVFTFSSEEGTPAYKLPNHLPQEVMDDRRYQLM
ELQQPISQKKNQQEVGKIVDVLIEQENPESGELIGRSGRFSPEVDGLVYVKGQAKLGTIV
PIAIHHADTYDLYGQVVNN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataagccaacaattgccatttctcacttgggctgcgagaaaaatcggattgat
acagaacacatgctgggaatgctcgtagaagcaggctacggtgtagatacaaatgaagag
ttagccgattacgttatagttaatacctgtagttttattgaagcggcccggcaagaatct
gtcagaactttggtagaactggcagaggcaaataaaaagatcgtaatcactggctgtatg
gcgcaacacttccaagaacaacttttggaagagttacccgaagcagtcgccgttgtcggc
actggcgattatcacaaaattgtaaatgtaattgagcgtgttgaacttggcgagcgggtc
aaacaggttagtattgagccaacctacattgccgacgagactacaccgcgctatcgtact
acaaccgagggcgtagcttatctacgggttgcagaaggatgtgattatcgttgtgcattt
tgtatcattcctcatcttcgagggaaccagcgatcgcgtactatagaatctatcgtcgcc
gaagcggagcagttagttagtcaaggggtaaaggaaattattctaatttcccaaatcacc
actaattacggtctagatatttacggccagccaaaattagcggaattacttcgcgctttg
gggaaagtagatataccgtggatcagaatgcactatgcttatcccacgggactaacccca
gatgtgattgcggcgattcaagaaacacccaacgtcttgccttacctggatttgcccttg
cagcattcccatccagatgttctccgcgccatgaatcgtccttggcaaggacgcgtaaat
gatgggattatagatcgcattagaacggcgctaccaacagccgtaatgcggacaacattt
attgttggtttcccaggagaaacaagcgagcattttgagcatctactagagttcgttcag
cggcatgaatttgatcatgttggtgtcttcaccttttcctctgaggaaggaaccccagct
tacaaactaccaaatcacttgccccaagaagtgatggacgatcgccgataccaactgatg
gaactccagcaaccgatttctcaaaagaaaaatcaacaggaagtaggcaaaatcgtcgat
gtcctgattgagcaagaaaatcctgaaagtggtgaattaatcggtcgttcaggtagattt
tccccagaggttgatggtctggtatatgtcaaaggccaggcaaaattaggaaccatcgtg
ccaatagcgattcaccacgctgatacatacgacctctatggtcaagtagtcaataactaa
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