Nostoc edaphicum: HUN01_26310
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Entry
HUN01_26310 CDS
T07001
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HUN01_26310 (ltrA)
Enzymes [BR:
ned01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HUN01_26310 (ltrA)
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GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
Endonuclease_7
Motif
Other DBs
NCBI-ProteinID:
QMS90922
UniProt:
A0A7D7QI14
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Position
complement(5604396..5606183)
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AA seq
595 aa
AA seq
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MSNTQSQRLMVEWHSINWRKLERSVYKLQKRIYQASARGDVKAYRRLQKTLMKSWSARAL
AVRRVTQDNQGKKTAGVDGVKSLTPKQRLELTDILNLGTKVSPTRRVWIPKPGTEEKRPL
GIPTMKDRALQALVKLALEPEWEARFEPNSYGFRAGRSCHDAVEAIFKAIKLKPKFVLDA
DISKCFDRIDHEALLRKINTFPTIRRQVRAWLKAGVMDDKQLFPTSEGTPQGGVISPLLA
NIALHGMEERIKQYANTLPCKDGLNKRDTRRSLSLIRYADDFVILHENITIVQRCKEIIS
EWLKSMGLELKPSKTRLTHTLNQYEQEKPGFDFLGFSIQQFPVGKYHSKRGFKTIITPSK
QKQKVHYEQIANVIETHKAAPQAALISHLNPIIRGWANYYATVVSKVAYSDIDDLTYQKL
YAWAKHRHPKKNWGWVSKRYWQSIGGDNWIFATRKEGLTPTRLLKHADTPIVRHVKVKGE
SSPYDGNLVYWSTRMGKNPEMPNRTSKLLKKQKGKCTHCEMFFRESDVLEVDHKIPKSQG
GKDIYDNLQLLHRHCHDTKTANDGSPGIKSGCNSAEPKPTRILEKVKDKWVMRYA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatacacagtctcaaagactgatggtggaatggcactctattaactggcgtaag
ctagagcgtagcgtgtataagctccaaaagagaatttatcaagcctctgcccgtggtgat
gtaaaagcatatcgcagactccaaaagacactgatgaagtcatggtcagcaagagcttta
gcggttcgtagagtcacccaggacaaccaagggaaaaagacggctggtgtagatggcgtt
aagtcgctgactccaaagcaacgtctagaactcactgatatcttaaacctgggtacaaag
gtcagcccaactaggcgcgtatggattcctaagcctggaacggaagagaagcgacctttg
ggtatacctacaatgaaagaccgagccttgcaagcacttgtcaaactggcactagagcca
gaatgggaagcgcgatttgaacccaactcatacgggttcagagccggacgctcatgccat
gatgcggtagaagcaatatttaaggcaatcaagctcaagccaaaatttgtactcgatgcc
gacatatcaaaatgctttgaccgcatcgaccatgaagcactgctgagaaaaataaataca
ttccccaccatccgccgacaagtacgtgcatggttaaaagcgggagtgatggatgataag
cagttgtttccaacatctgagggtacgccacagggcggggtcatttctccgttactggca
aacattgccctacatgggatggaagaacgaattaaacaatacgccaataccctcccttgt
aaagacggtcttaataaacgggatacccgtagaagtctaagtctaattcgttatgccgac
gatttcgtaattctccacgaaaacataaccatagtccaaagatgcaaagagattatctct
gaatggttaaaaagcatgggtttggaactaaagcccagtaaaacgagactgactcacacc
ctcaaccagtatgagcaggaaaaaccagggttcgatttccttggtttttcgatacaacaa
tttccagtaggaaagtatcactcgaaacggggttttaaaacaatcatcaccccaagcaag
cagaagcaaaaggtacattatgaacaaatcgctaatgttattgaaacccataaggcagct
ccgcaagcggcgctaatcagccatttaaacccaataattaggggatgggcaaactactac
gcgactgtggtaagtaaggtagcttactcagatatcgatgacctcacgtaccaaaagtta
tatgcctgggcaaaacaccgccaccccaaaaagaactggggatgggtgtcaaaaaggtat
tggcagtctataggcggtgataactggatattcgcaaccaggaaggaaggtttaacccca
actcggttactaaaacatgccgacactccaatagtacgtcatgtgaaagttaaaggcgaa
tcgtcaccatacgacggaaatctggtttattggagtacaagaatgggtaaaaaccccgaa
atgccaaataggacttcaaaactcctgaaaaagcaaaaagggaagtgtacccactgcgaa
atgtttttccgcgaaagcgatgtgctagaagttgaccataaaatccctaaatcgcaaggt
ggtaaggatatttacgataatttgcaacttctacacagacattgccacgatacaaaaact
gccaacgatggtagtcctggcataaaatccggctgcaatagtgccgagcctaagcccacc
agaatacttgaaaaagtcaaggataaatgggtaatgaggtatgcgtga
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