Nostoc edaphicum: HUN01_27650
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Entry
HUN01_27650 CDS
T07001
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ned
Nostoc edaphicum
Brite
KEGG Orthology (KO) [BR:
ned00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ned03016
]
HUN01_27650
Enzymes [BR:
ned01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HUN01_27650
Transfer RNA biogenesis [BR:
ned03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HUN01_27650
Prokaryotic type
HUN01_27650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
MSP1_barrel
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QMS91179
UniProt:
A0A7D7QF55
LinkDB
All DBs
Position
complement(5910091..5911050)
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AA seq
319 aa
AA seq
DB search
MQITFLGTSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQIMRSELKISQLSRIFI
THMHGDHIFGLMGLLATCGLAGNVERIDIYGPPGLNDYIHSASRYSHTHFSYPIKVHAIR
PGVIYEDEDFTVSCGNLHHRIPAFGYRVAEKDRSGRFDVEKAKALQIPAGRIYGQLKRGE
TVTLDDGRVIDGTQLCGPTEIGRKIAYCTDTIYCDGAVELAHDVDVLIHEATFAHQDADM
AFQRLHSTTTMAAQTALAAGAHRLIMSHFSPRYAPGNTLELKDLLKEARAIFPRTDMAHD
FMIHEVPRRRQVELTKVGV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcagataacattcttagggacgagttccggtgtacccacgcgatcgcgcaatgtttcc
agtgtcgctctgagattaccacaaagggcagaactctggttattcgattgtggcgaaggc
acccagcatcaaattatgcggagtgaactgaaaatcagtcaactctcccgaatttttatc
acccacatgcacggcgaccacatctttggcttgatgggacttcttgctacttgcggcttg
gctggcaatgtagaacgaatcgatatctatggcccacctggattaaatgattatattcac
tccgcctcacgttactcccacacccacttttcttacccaatcaaagttcacgccatccgt
ccaggggtaatttatgaagacgaggacttcaccgttagctgtggtaacttgcatcaccgc
attcccgctttcggctaccgcgtagccgaaaaagaccgatcaggacgctttgatgtggaa
aaagccaaggcgttgcaaattcctgctggtcggatttatggtcaactcaagcgcggtgaa
acagttacccttgacgacggacgggtgattgatggcacccaattgtgcggccccacagaa
attggtcgaaagattgcctattgtacagacacaatttattgtgatggggcagtggaatta
gctcatgatgtagatgtattaattcacgaagcaacctttgcccatcaagatgcagatatg
gcttttcagcgattgcattccacaaccacaatggcagcgcaaacagctttagccgcaggg
gcacatcggctgattatgagtcattttagtccccgctatgctcccggaaataccttggag
ttgaaggatctccttaaagaagcccgtgctatttttccccgtactgatatggctcacgat
tttatgattcatgaagtaccgaggcgacggcaagtagagttaaccaaggtaggcgtttaa
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