Neorickettsia findlayensis: GP480_00240
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Entry
GP480_00240 CDS
T06378
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nef
Neorickettsia findlayensis
Pathway
nef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GP480_00240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nef03019
]
GP480_00240 (pnp)
03016 Transfer RNA biogenesis [BR:
nef03016
]
GP480_00240 (pnp)
Enzymes [BR:
nef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GP480_00240 (pnp)
Messenger RNA biogenesis [BR:
nef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GP480_00240 (pnp)
Transfer RNA biogenesis [BR:
nef03016
]
Prokaryotic type
tRNA degradation factors
GP480_00240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
OB_RRP5_4th
TetR_C_42
KH-I_KHDC4-BBP
S1_RRP5
SBBP
Motif
Other DBs
NCBI-ProteinID:
QHD64909
UniProt:
A0A6P1G8W0
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All DBs
Position
complement(49953..52229)
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AA seq
758 aa
AA seq
DB search
MFEIKESSIEWEGKSLHIKTGEVARQAAGAACVSYGGTVVLAVVTLQKDSAASKKTSDLS
GLALVTNFLAKSYALGRIPNGFFKREGKLSEREVLASRVVDRAVRPLIQENLVNEVNIVC
KLLAHGNKRVLPEVPALIAASVALQLSGIPFSGPVVGVDVNRRGTEITCNEITETEDGLG
VFVACTEESIVMVEAEANESSEEEVVSALSEALKSAKPIFSFINEFVRGVGTVKSVGVLY
DNKELYEKVRLLCSAQLENVYNEKINNKEERHNRLSQVYMDTFAELSADGYAESEILFFI
KKLEKEIVRKNVLENGIRPDGRGLTEIRPISIALDYLPGTHGSALFTRGGTQSLVVATLG
SYQDEQVMDDIDGERRESVLLHYNFLPYAVGEVGALRAPGRREIGHGRLALKAVKAILPG
KDVFPYTLRLVSEITESDGSSSMATVCGSSLALMDTGVPVTKHVAGIAMGLMTDGTKSAI
LSDISGDEDMLGDMDFKVAGTRSGIVALQMDMKVRGISISTIRDALNQALTGRLHILAKM
ENVIAEPRKNLKDSAPKILCYKIDKDVVHKVIGSGGKTIRGISSDTSTKIDIDQNNYVYI
MAETEEALMEAKSRVDIASGASDLNVSVSQLKIGELYEGKIVSIVDFGLFVALPNKQEGL
VHISEISRSRVNDIRADHTEGQPVTVRIKDIGPDGKIKLTMRIDEDRVGSGSGPSPKKRF
GAPPRKNSKDHRSGGNERVFNDRSNSGEGSPVGRKRFF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagataaaagaatcctccatagaatgggaaggtaagagtttacatataaaaacc
ggtgaggttgcgcgtcaggctgctggtgctgcctgcgtttcgtatggcgggaccgttgtg
ctggccgtagtaactcttcagaaggatagtgcagcttctaaaaagacttccgacttgtcg
ggtctagcacttgtgacgaacttcttggctaaatcgtatgctctcgggcgtataccgaac
ggtttttttaaacgggaaggcaaactctcggagagagaggtcttggcttctagagtggtt
gatagggctgtgaggccccttatacaggaaaacctcgttaatgaagttaatatagtgtgc
aaacttctcgcacatggcaataaaagagttctacctgaggtaccggctctgattgcggcc
tctgttgcattgcagctttctggaattccgtttagcggccctgttgttggggttgatgtt
aacaggcgtgggacagaaataacatgtaacgagattacggaaacagaagatgggcttgga
gtatttgttgcttgtacagaggaatcgattgtgatggtggaagccgaagcgaatgaatcc
tctgaagaggaagttgtcagtgccctttcagaagcgctgaaaagtgcaaagccgattttt
tcctttatcaacgagtttgttagaggtgttggcacagtaaaatcagtaggtgtgctctat
gataataaagagctctatgagaaagtgcgtttgctctgtagtgcacaattagagaacgtc
tataatgagaaaataaataataaagaggagcgacataacagacttagccaggtctacatg
gatacctttgctgagttatcagctgatgggtatgctgaatccgagattttattcttcatt
aaaaagctcgaaaaagaaattgtaaggaaaaacgttttggagaacggtataagaccggat
ggaagaggtttgacggaaatacgtccgatcagtattgctctggattatctccctggcact
cacggttctgctctgtttactcgtggtggaacgcagagtctggttgtagctacgttggga
tcttatcaagacgagcaggttatggatgacatcgatggtgaaaggagagagtccgtgctt
ttgcactacaactttttgccgtatgcggttggtgaagttggtgctctgcgcgcacctgga
agacgagagatcggtcatggacgcttggctttaaaagcagtgaaggccatactaccgggt
aaggacgttttcccttataccttgcgtttggtctctgaaattacagaatctgatggctcc
tcttctatggcgacggtatgtgggtcgtctttggctctcatggatacgggagttcccgtt
acaaagcacgtagccggaatagctatgggcttaatgactgatggaacgaagtctgcaatt
ctaagtgatatctcaggtgatgaagatatgcttggagacatggatttcaaagttgcgggt
acacgaagtggtattgtcgcgcttcagatggatatgaaagtgcgcggcataagcatatcg
acaattagagatgcattgaatcaagcattaactggaaggttacacattcttgcaaagatg
gagaatgtaattgctgagccaaggaaaaatctcaaagactcggcgcctaagatattatgt
tacaagattgataaagatgttgtacataaggtgataggcagtggcggaaaaactattagg
ggaatttcctctgatacctccacaaagattgatatagaccaaaataactatgtttatatc
atggctgaaactgaagaagcattgatggaagcaaagagtagggttgatatagcttcaggc
gcttctgatttgaatgtgagtgtttcacagctcaaaattggcgaactatatgaaggaaaa
atagtgagcatagttgacttcgggttgtttgttgccctcccaaataagcaggaaggattg
gtccatattagcgaaattagtaggagcagagttaatgatatacgtgcggaccatactgaa
ggacagccagttacagtccggatcaaggatataggcccagatggaaaaattaaactgact
atgcgcattgatgaggatagagtaggcagtggaagtggcccctcgcctaagaagcgtttt
ggagctcctcctagaaaaaatagtaaggatcaccggtctggtggtaatgaaagggttttc
aatgatagatccaactctggtgaaggttcccctgttggtaggaagcggtttttctag
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