Neorickettsia findlayensis: GP480_00620
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Entry
GP480_00620 CDS
T06378
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nef
Neorickettsia findlayensis
Pathway
nef03030
DNA replication
nef03430
Mismatch repair
nef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GP480_00620 (dnaE)
03430 Mismatch repair
GP480_00620 (dnaE)
03440 Homologous recombination
GP480_00620 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nef03032
]
GP480_00620 (dnaE)
03400 DNA repair and recombination proteins [BR:
nef03400
]
GP480_00620 (dnaE)
Enzymes [BR:
nef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GP480_00620 (dnaE)
DNA replication proteins [BR:
nef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GP480_00620 (dnaE)
DNA repair and recombination proteins [BR:
nef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GP480_00620 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QHD64972
UniProt:
A0A6P1G9H3
LinkDB
All DBs
Position
134201..137428
Genome browser
AA seq
1075 aa
AA seq
DB search
MRRQTFVHLRVRSDYSLLRAVTKPRKIVDLARAAGMPAVALTDIDTMAGALEFAEYAKSS
GIQPIIGIDLSISHNRVDSRVLLIAKNEEGFHNMIKLSRVVSARRVALNEVFTYSKGLIL
LLGEFFLDAINSYSINAETLVSDLKQVFDKDLFIEIQRLGNQSAEEKLIQLGYECNIPFV
ATNDVLFPNRDFREAHDVLTCIGGLTYVSDINRVHYSPESYFKSAEEMFALFSDLKEALH
NTVLIARRCSFMPEVRSPILPKFECERDENDELRRLSYAGLQRRMGDDIPQNYLDRLEYE
LGIIIDMNYSGYFLIVADFIRWSKANDIVVGPGRGSGVGSIVAWCLGITGLDPLKFALFF
ERFLNPVRVSMPDFDVDFCQERRHLVIEYVRKKYGHVAQIMTFGTLQPRAALRDVGRVLQ
LPYGRVDRICKMIPNNPANPISLQEAINLDKDLQKESENDESIAKLLDLALKLEGTLRHA
STHAAGIVISDTPIENYLPIYHDKESDIPVTQYSMKYVEKAGLIKFDFLGLKTLTVINQA
CSLVRLKDPNFDMDSIPLNDKRTYELLSAGNAIGVFQLDNAYMCETLKRLHPDCFEDIIA
LISLNRPGPMANIPTYIARKHGKETVKYPHPLLESSLKETFGVVIYQEQVMEMVRLLAGY
TLAEADILRRVMGKKIRAEMSEQTEKFVEGAKRNGIDAEKAREIFEMVEKFAGYGFNKSH
AAAYALISYQTAFLKANFPIEFTTAALNLELHHTDKLAILIQDAKNCGITILPPDINKSK
IFFSIEGNAIRYSLAALKNVGEAAASAIEKRSPFKTIAELQRCLDGKIVHRKAVESLIKS
GSLDVLSPERSRLYSCMNELVGKEDNSAQIALFDISVVKPEKVFAPWNFFEKTQCEFDAL
GFFLYDHPLSPYQRFLKLSPNQIAGVITELRIRSRGNRKFAVMHVSTVSDIYTVVFYESE
VIDSRRELFVVGVKVVLTLLKSDNGYVCSNLAELHEFIFADYKRRFAILVNRKEQVTALK
DALRRGGKCEVIVVVRSDSQYTRIILGHDFDLAIEKLALIEGVEILKHRVRSIST
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcagacattcgtacatcttagagtacgaagcgattattcgctcttacgggca
gttaccaaacctagaaaaattgttgatctagcgcgtgctgctggcatgccagctgttgcg
ctcactgacattgatacaatggcaggtgcgcttgagtttgctgagtatgctaagagctct
ggtattcaaccgattattggaattgatctttcaatttcacacaatcgtgttgactcacgt
gtacttctgatcgcaaaaaacgaagagggctttcacaatatgattaagctctctagggta
gtttctgcgagaagagttgccttaaatgaggtttttacctatagcaaaggtctaattctg
ctgttaggagagttctttcttgatgctatcaatagttattcgattaacgcggaaactctg
gtatccgatctaaagcaagtctttgataaggatctttttattgaaatacaacgtctgggc
aatcaatctgcagaggaaaaacttattcaacttggatatgagtgtaatattccttttgtt
gctacaaacgatgttctttttccgaatagggatttcagggaggcacatgacgtattgacc
tgcatcggtggtcttacatatgtcagtgatataaaccgcgtacattactcaccagaatcg
tattttaaaagtgcagaagaaatgtttgcacttttctctgatttgaaggaagcgttgcac
aacactgttttgatagcgcgtcgttgtagctttatgccagaagtgaggagtcctattctg
ccaaagtttgaatgcgaaagagatgagaacgatgagttgaggcgtctgagctatgctggt
ttacaaagaaggatgggggatgatattccacaaaattatttggataggctcgagtatgag
cttggcattatcattgacatgaattattctggctactttttgatagtggctgatttcata
cgttggagtaaggccaatgatattgttgttggtcctggaagaggatctggtgtcggatca
atagttgcctggtgtcttggtattactggtttagatccactgaaatttgctctttttttt
gaaaggttcctgaatccggttcgtgtatcaatgccggattttgatgtggacttctgccag
gaaagacggcatcttgtgatagagtacgtgaggaaaaaatatggtcacgttgctcaaata
atgacctttggtactctccagcccagagctgcattgcgagatgttggaagggtccttcag
ctgccctatggtcgagtagataggatctgtaaaatgattcccaataatccagccaatccg
atttctttgcaggaggcaataaatctcgacaaagatctccaaaaagaaagtgaaaatgat
gaatcgatagccaagttgcttgatcttgctcttaagctggaaggaacactaagacatgca
tcgactcacgctgctgggatagttattagtgatactccaatagagaattatctacctatt
taccatgataaggagtcagacattccggttactcagtattcgatgaaatatgttgaaaaa
gcaggactcataaagtttgattttctaggtttgaaaacactaacagtaatcaatcaggca
tgctcattagtacgattaaaagatcctaatttcgatatggattctattcctcttaacgat
aaaaggacgtatgagcttctttcagcgggaaatgcgataggtgtgtttcagttggataat
gcgtacatgtgtgaaacgctaaaacgcctgcatccagactgttttgaagatataattgcc
ctgatttcgcttaataggcctggtcctatggcgaacattccaacgtatatagcaaggaaa
cacggaaaagaaacagttaaatatccacatccactactggaatcttcattaaaagaaact
tttggtgttgttatctatcaagagcaggtaatggaaatggtgcggcttcttgccgggtat
acactcgctgaagcagatattctccggcgtgttatgggtaagaaaatacgtgcggaaatg
tcagagcaaaccgagaaatttgtcgagggtgcaaaacgtaacggtattgatgcggaaaaa
gctcgagaaatcttcgagatggtagaaaagtttgctggctatggttttaataagtcacat
gctgctgcatatgcgctcatttcataccaaacggcctttctcaaggctaactttccaatt
gagtttaccacggctgcccttaatctcgaactgcaccatacggacaagcttgcaattcta
atacaagatgcaaaaaactgtggtattacaattttgccgccagatataaataagtcaaaa
attttcttctctattgagggtaatgcaataaggtactcgctcgcagctttgaagaatgtt
ggagaagctgcagcttcagcaatagaaaaaagaagcccgttcaaaacaattgcggaactt
caaagatgcttggatggaaaaatagttcatagaaaagctgttgaaagtcttataaagtcg
ggttctctggatgtactctctcctgagaggagtagactttattcttgtatgaacgaatta
gtggggaaagaggataatagtgcacagattgcattatttgatatctctgttgttaaacca
gagaaagtttttgcgccatggaatttttttgaaaaaacacagtgtgaatttgatgcgctt
ggcttttttctttatgatcaccctctttctccatatcaaaggtttttaaagctttcaccg
aatcagattgctggtgtgataactgaattgagaataagatcgaggggcaatagaaagttt
gctgtgatgcatgtttcgacagtaagcgatatatacactgtcgtgttttacgaatccgaa
gtcattgactccagacgtgaactttttgtagttggtgtaaaggttgtgctgaccctctta
aagagtgataacggctatgtatgtagcaatttggctgaattacacgaatttatctttgcg
gattataagagaagatttgcaattctcgtaaaccgtaaagaacaggttaccgcattgaag
gacgctctaaggcgtggtggtaaatgtgaggttatagtcgttgtgcgtagtgattcacag
tacacgaggattattttggggcatgattttgatcttgccattgaaaagcttgcattgatt
gagggtgtcgaaattctcaagcacagggtgcgctcaattagcacatga
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