Neorickettsia findlayensis: GP480_01270
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Entry
GP480_01270 CDS
T06378
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nef
Neorickettsia findlayensis
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GP480_01270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nef03021
]
GP480_01270
Transcription machinery [BR:
nef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GP480_01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
TnsD
HTH_9
DUF859
Motif
Other DBs
NCBI-ProteinID:
QHD65088
UniProt:
A0A6P1G9V3
LinkDB
All DBs
Position
complement(253710..255572)
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AA seq
620 aa
AA seq
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MIKGYSSKFHQVVKALITKGVKRGFVTYGELSDSFSDEDFENLNCIEEAISKLEESGIGI
LEKDEEDELSEEVKEEDEEEDEAADILGHTDDPVRLYLREMSYVKLLSRDDEVEIAKAIV
AEKFESLSAVLLFPSVMKSIIDLGTKLREGTISLREVIESDSGLKSELTEETSKGDEFFE
GIDGKPEEVNQMSDEELMEKVLEIFVDLGGIITSALDKVKEGQMVKIVDGEVILDPGYGE
LHTLAVNHLNQVKLNPKLLAEFFESIRRKNELILEKKKVLLTFLEEHGLDRTTLIKSKVH
ILNTEVLSELLKKHNICDAHFSLEEFLSPVRELEKSEGMDYESISFLSRKVATHLDNANA
AKHRMVEANLRLVISIAKKYTNRGMPFPDLIQEGNIGLMKAVDKFDHRRGHKFSTYATWW
CRQAITRAIADCGSIVRKPVHIHETANKVMRTRRRLYNLNGREPTVEEIANLLKISPDKV
KKSLKVNQDPISLESPVGDDSNSGSFGDFIEDKNAVSQVDVVLSKNLRKVLDEALAMLSP
REEKILRYRFGLCNSVHSPEDEHYLKSLKIDLNRGTNLTLEQVGILYNVTRERIRQIESK
SLRKMRSPSRSIKLRTFLKY
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaggttacagttctaagtttcatcaagttgttaaagccctgatcaccaaagga
gtaaaaagaggtttcgtaacatacggtgagttgagcgattcattttcagatgaggacttt
gaaaatttaaattgcatagaagaagcaataagcaagctggaggaatcaggcataggcatc
ttagagaaagatgaagaagatgagctcagtgaggaagtcaaggaagaagatgaagaagag
gatgaagccgctgatatattaggtcacacggacgatccggtaaggctataccttcgtgag
atgagctacgttaagctcctttctagagatgatgaggtggaaatagcaaaggctattgta
gcagaaaaattcgagtcgctttccgcggttttgctcttcccttcagtaatgaaaagtata
atagacctcggaacaaaactcagagaaggcacgatctcgctgcgtgaagtgatagaatcg
gactcaggattaaagagtgagcttactgaggaaacaagcaaaggcgatgagttctttgaa
ggcatagacggtaaaccggaagaagtaaaccagatgtctgacgaagagctcatggagaag
gtcttagaaatctttgtagatctcgggggaataatcacatccgcgctcgataaagtgaaa
gaagggcagatggtaaaaattgtagatggtgaggtgatactcgacccaggatacggagag
ctacacactcttgcagtaaaccatctgaaccaagtgaagctcaacccaaagcttcttgct
gagttttttgagagtattcgaagaaagaacgagcttattctcgaaaagaagaaggtactc
ctaacattcctagaggaacatggattggatagaacaaccctaatcaaaagtaaagtgcac
atcctgaatactgaggttctgtcagaactcctgaagaagcacaatatttgcgacgcgcat
ttctccctcgaagaattcctctctccagtcagagagctagaaaaaagtgaaggaatggac
tacgaaagtatcagctttctaagtaggaaggttgctactcacctggataatgcaaatgcg
gcaaaacatagaatggtagaagctaatctaaggttagtgatctcaattgctaagaagtac
actaatagaggcatgccattccctgatctgattcaagaaggaaatatcggactgatgaaa
gcagtagataaattcgatcatagaaggggacataagttttctacatacgcaacttggtgg
tgcagacaagctataacccgtgctatagcagattgtggaagtatagtaagaaaacctgta
cacatccacgagactgcaaataaggtaatgcgcacgagaaggagactatacaacctcaat
ggcagagaacctaccgtcgaggagattgcaaatctacttaagatttctccggataaggtt
aagaagtcactcaaggtaaatcaagatccgatcagtctggaatcaccagtgggcgatgac
agtaacagcggttcttttggcgactttatagaagataagaacgcagtaagccaagtggat
gtggttctctcaaaaaacttgaggaaagttctggatgaagcgcttgcaatgctctcccca
agagaagaaaaaatcctgagatataggtttggactatgtaatagtgtgcacagtcccgaa
gatgagcactacttaaagtctctgaaaattgaccttaataggggaacaaatctcactcta
gaacaagtaggtatactgtacaatgtaacaagagaaagaatcagacaaattgaatcaaag
tcgttaaggaaaatgagaagcccgagtcgatctataaaattaagaactttccttaaatac
tag
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