Neorickettsia findlayensis: GP480_01440
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Entry
GP480_01440 CDS
T06378
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nef
Neorickettsia findlayensis
Pathway
nef03420
Nucleotide excision repair
nef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GP480_01440
03430 Mismatch repair
GP480_01440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nef03400
]
GP480_01440
Enzymes [BR:
nef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GP480_01440
DNA repair and recombination proteins [BR:
nef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GP480_01440
MMR (mismatch excision repair)
Other MMR factors
GP480_01440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
DUF6305
Motif
Other DBs
NCBI-ProteinID:
QHD65119
UniProt:
A0A6P1G9H2
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All DBs
Position
complement(289976..291829)
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AA seq
617 aa
AA seq
DB search
MNLNYEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIKSGYAHPNQIMAVTFANKAA
NEMIQRINEIVGEMKFHWIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQVRMLQKVAQ
EKKIETDKALLKKYLSLISAWKDKAFTPSRVRFNNAANTWFEKQALSIYDAYQEKLKENN
SMDFGDLLMHNVTLFNKDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNICC
VGDDDQSIYGWRGAEVGNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLT
KKLWTAYPSGEEIQIVTYIDSEQEARAIIRKIKERKLVCPYSDTAILVRAGFQTRAFEEA
AIHENVPYRVVGGLKFYERKEVRDIIAYLRLVTNPNDNLAFERIINTPKRGLGQASMNKI
YNYSLEQGCSMFEAARKLEENEKLKSTALLTFVKQVKKWQEDSLNHSLHDLLKKITLESG
YISALKEQDESRIENVDELFRVIQEFDNATDFLQHVSLLTESDTQTNNSDAVNVMTLHAS
KGLEFEQVFLPGWEDGTFPHARSLFSTEQIEEERRLAYVGITRAKRFLTITSANRRLIRN
SWQNTVKSRFILELAEK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaactatgagcaaagacttgccgtagaaaccgtaaatggtcctgtcttgata
cttgctggtgctggaacaggcaagacaaagacgttggtacatagaatagcccacttgatt
aagtcagggtatgcgcacccaaatcaaattatggccgttaccttcgcgaataaagctgca
aatgaaatgatccagcgcatcaacgagatcgttggagaaatgaagttccactggattgga
acatttcatgcagcagcagctaagatcctaagaatagaagcggaaaaacttggttttaaa
cctgactttacaatactagacgtagatgaccaagtcagaatgcttcagaaagttgcacaa
gaaaagaaaatcgaaacagataaagctctactcaagaagtacctaagcctgatctcggca
tggaaagataaagccttcactccaagtagggtgagattcaacaatgcggcaaacacatgg
tttgaaaagcaagcactctctatatacgatgcttaccaagaaaaactaaaggaaaacaat
agcatggactttggggatttgctcatgcacaacgttacccttttcaacaaagacgcggaa
actttagaaaaatacaaagaaaaattcagatacatcatggtggatgagtatcaagatacg
aatttatgtcaatatctatggctgaggctattagcacagaagcactcaaacatctgttgc
gttggggacgatgatcaatcaatttatgggtggcgcggcgcagaagtaggtaacatcctg
aggttcgcaaaagattttgaaggagcaaaagttatcaagctggaacaaaattatcgctcg
acgaataaaattctcactgccgcgcacaatatcataaaaaataatcagtccagactaaca
aaaaagctttggacagcatacccgagtggtgaggaaatacagattgttacttacatagac
agcgaacaggaagcaagagcaattatcagaaagataaaggaaagaaaattagtgtgtccc
tacagcgatacggcaatccttgttagggcaggttttcagacgagagccttcgaggaagca
gccattcacgaaaacgttccctaccgcgtcgtgggaggactaaagttctacgagagaaaa
gaagtaagagatattattgcttatttaagactcgttaccaatccaaatgataacctagcc
tttgaaagaataataaacactccaaaaaggggtctagggcaagcatccatgaacaagata
tataactactcacttgaacaaggttgctcgatgtttgaagcagctagaaaacttgaggaa
aacgaaaaacttaaaagcacagcgcttctgacatttgtgaaacaagttaaaaaatggcaa
gaagactctcttaatcacagtttgcatgacttgctaaaaaaaattacactggaatccggg
tacatatccgcattaaaggagcaggacgagagcaggattgaaaacgttgacgaacttttc
agggtaatccaggaattcgacaatgccacagattttttacaacatgtgtcacttttgaca
gaaagcgatacacaaacaaataatagcgatgctgtcaatgtgatgaccttgcatgcttct
aaaggactagaatttgaacaagtatttcttccaggctgggaagatggaacgtttccgcat
gcaagatcactatttagtactgagcaaattgaggaagagcgtcgtttagcctatgtggga
ataacaagggctaagaggtttttgacaataacgagcgctaatcgaaggctaataagaaac
tcttggcaaaacactgtaaaatcgagattcatattagagttagcagaaaaataa
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