Neorickettsia findlayensis: GP480_02900
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Entry
GP480_02900 CDS
T06378
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nef
Neorickettsia findlayensis
Pathway
nef03410
Base excision repair
nef03430
Mismatch repair
nef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GP480_02900 (recJ)
03430 Mismatch repair
GP480_02900 (recJ)
03440 Homologous recombination
GP480_02900 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nef03400
]
GP480_02900 (recJ)
DNA repair and recombination proteins [BR:
nef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GP480_02900 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GP480_02900 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GP480_02900 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Toprim
FAS_pseudo-KR
Motif
Other DBs
NCBI-ProteinID:
QHD65583
UniProt:
A0A6P1GBK1
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All DBs
Position
632544..634277
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AA seq
577 aa
AA seq
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MQNLRTSIKGSIWVHNPIPYKELLFLRQKFGLSLTVASVLYNRVEADDDIANFLDPKLKH
TLPDPFSLLGMKEAIERILEAISEDEKIVIYGDYDVDGATSSALLKNYFREIGKKVDVYI
PDRITEGYGPNKAAFTQLKKEGYTLCITVDCGTLAHTEIEVANTIGLDVIVVDHHISADV
IPPATAVINPNRIDQPNVPYTEHLAAVGVSFLLLIGLNVILRTKGFFDNKSEPNLINYLD
LVALGTVCDVVRLTGINRAFVKQGLKVINQRRNLGLRTLTHELKLFNTLDTYHLGYIIGP
HINAGGRISQSSLGSRLLSTQNPAEAEEIATTLCVLNLKRKEIEKTALQEVITQVEKTNK
KIILAASANWHQGIIGIVASRIKERYHLPTIILSIDGNIAKASARSIKGANIGVAVIAAK
ESGLIIEGGGHKMAAGFSCAVEKIPAIREFFEEYFKEVDTQESIRIDSELYIDTITSDLC
EDLKILAPHGSGNPEPKFVLKNVRIVTSRIISEDGHIACTLRDARTHTSIRGIAFRADPV
LKEAILNCEVTSLLVKIKADSLGYSSKPQVIIEDAST
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacctcaggacatcaattaagggaagtatttgggttcacaatcccataccatat
aaagaactactcttcctaagacaaaaatttggactgtcactaacagttgcatcagttttg
tacaatcgtgtcgaagcagatgatgatatagcaaatttccttgatccgaaactcaaacat
actttaccggatccatttagcctgcttggaatgaaagaagcaatagaaaggatactggaa
gcaatatctgaagatgagaaaattgttatctatggtgattacgacgttgacggtgcaacc
tcatccgcgcttttgaaaaattacttcagagagataggtaaaaaggttgacgtatatatt
ccagatagaattactgagggttatgggccaaacaaagctgcatttactcaactgaaaaaa
gaaggatacacactatgcattacagtagactgcggtaccctagctcacactgaaatagaa
gtggcaaacacaattggcctggacgtaatagttgtagaccatcacataagtgcagatgta
atacctccagccacggctgtaattaatccaaatagaattgaccagcctaatgtaccgtat
actgagcacttagcagccgtcggggtatcgttcctgctccttataggattaaatgttatc
ctcaggactaaaggcttttttgataataaaagcgaacctaaccttataaattatctagat
ctcgtcgcattaggtacagtctgcgacgtcgttagacttaccggaatcaacagagctttt
gttaaacaaggactgaaagttatcaatcaaagaagaaatttgggattacggacacttact
cacgaactcaagctcttcaatacattagatacgtatcacttaggctatataataggacca
cacataaacgcaggagggagaatatctcaatcttcgttaggaagtaggttactatcgaca
caaaatcctgctgaggcagaagagatagctacaactctctgtgttttaaatctcaaaaga
aaagaaattgaaaagacagcactccaggaagttattactcaagtagagaagacaaacaag
aagatcattcttgcagcaagtgcgaattggcaccagggaataataggaatagtcgcttcc
aggatcaaagagcgttaccatcttccgacaattattctcagtattgacggaaacatagct
aaggcaagcgcacgatcaataaagggcgcaaacataggagtggcagtgatagctgcaaaa
gaaagtggcttaataatagaaggtggaggtcataaaatggcagctggcttctcatgtgcg
gtagaaaaaattccagcaataagagagttttttgaagagtacttcaaagaggtagacaca
caagaaagcatccgtattgatagcgagctttacatcgatacaattactagtgacctttgt
gaggacctgaaaattttagcacctcacggttcgggcaatcccgaacccaaatttgtgcta
aagaatgtgagaatcgtcactagccggattattagtgaggatggacatatcgcctgcaca
ctgagagatgcaaggacacacacaagcattcgcgggattgcgtttagagcagatcccgtg
ctaaaagaggcaatcctaaattgtgaagttacaagccttcttgtaaagataaaagctgac
agtcttggatatagcagcaaaccccaggtgatcatagaagatgcgtcgacttaa
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integrated database retrieval system
