Neorickettsia findlayensis: GP480_03890
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Entry
GP480_03890 CDS
T06378
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nef
Neorickettsia findlayensis
Brite
KEGG Orthology (KO) [BR:
nef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nef03032
]
GP480_03890 (gyrA)
03400 DNA repair and recombination proteins [BR:
nef03400
]
GP480_03890 (gyrA)
Enzymes [BR:
nef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GP480_03890 (gyrA)
DNA replication proteins [BR:
nef03032
]
Prokaryotic type
DNA Topoisomerases
GP480_03890 (gyrA)
DNA repair and recombination proteins [BR:
nef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GP480_03890 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF1181
Motif
Other DBs
NCBI-ProteinID:
QHD65530
UniProt:
A0A6P1GB52
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All DBs
Position
847097..849706
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AA seq
869 aa
AA seq
DB search
MSTIIPVNLEQELKSSYLSYAMSVIINRAIPDVRDGLKPVHRRILYSMNELSFYWNKPYR
KSARVIGEVIGKYHPHGDSAIYDALVRMAQNFSLLVPLIDGQGNFGSVDGDPAAAMRYTE
VRLEYISKFLLDDLYENSVDFRSNYDNSETEPVVLPAKFPNILVNGTAGVAVGMATNVPT
HNLSEVIEACKLYLEDNNVTTDELLKVIKGPDFPTGGLIIGEEGIKASFETGRGSIIIRS
KTHFEETETRKAIIVDELPYQVNKAKLIENIALLVKEKRLDSISDLRDESNKEGIRVVIE
LKRGASFEVVLNQLFQMTQLQTSYSTNMMLLDNMKPTLMSLRDILAAFIAHRKEVISRRT
EFRLAKAREKANVLVALYVAILNIDEVVRILKSSGDNETAIKALCAKHWAIDEELELLVE
TISNIKLLNREYKLSTAQSKAILEMKMQRITNTEKGQLVAEIHAEMNIVKECASILGNEA
VLINVIVQELNEIKAKYPQARKSVILKNVNAVYAEEDLIEREQVVVTATYSGYIKRVQIS
NYRVQRRGGKGRIAQNIKSEDQLAQIFVLSTHDEILFFSSKGKVYKLKAYKLPIGEPQSR
GRALVNIFDLADDESITSILPLKNSDAENLIFLTAQGKVKRNSMSDFAYVPANGKVAIKL
NDNDALISVKTAQNEDCIFISTKDGKCIRFLVEDLRVLKSRSSEGVKAITLGKDDNAISL
SILNKRILSPENKAEYMKTKFLERIQNPENHEEQFVLTVTENGYGKITSSYEYRITNRGG
VGIINISTSERNGKVVSSFKVTLSNHIMLVTNRGQVIRIEASNIPVLGRNTQGVRLFSIR
AEERVASVTEVEEVEEEDSEINENCQNDS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccataataccggtaaatctagagcaggaactgaaatcctcttacctttcttac
gcaatgagcgtaattataaacagggccattcccgatgtacgagacggactgaagcctgta
cataggagaattctgtattctatgaatgagctttctttctattggaacaagccctataga
aagtcggctagggtaatcggtgaggttattggtaaataccacccgcacggtgatagtgct
atatatgatgctctggttcgtatggcacagaacttttccctactcgtaccgttgatagat
gggcagggaaactttggttctgtagatggcgatccagctgcagcaatgcgctacacagaa
gtacgtctggagtacatatctaagtttctactcgacgatctatatgaaaacagcgtggac
ttccgttcaaactatgataattcagaaacggagcctgttgttctgccagcaaaattccca
aatatcctggtcaatggaacagccggggtagcagtcggaatggcaacgaatgtaccaact
cataatctatccgaagtaatagaggcatgtaagttgtacttagaagacaataacgtaaca
actgacgaactcctaaaagttataaaaggccctgacttccctacagggggattgattatc
ggcgaggaaggaataaaagcatcttttgaaaccggtagaggctccattatcatacggagc
aagacacatttcgaagaaactgaaacaagaaaagcaattatcgtcgatgagctcccgtac
caggttaataaagcaaagttaatagaaaacatagctcttttggtgaaggaaaagagactt
gattcaatcagtgatctgagagacgagtcaaacaaggaaggaatacgggtcgtaatagaa
ctaaaaaggggtgcttcatttgaagtggttctgaaccaacttttccagatgacgcagctt
cagacatcgtacagcacgaatatgatgcttcttgacaacatgaagcctactctgatgtct
cttagggacatcttggcagccttcattgctcacagaaaggaagtaatctcgagacgaaca
gagtttagactcgccaaggctagagaaaaggctaacgttctggtcgcgctgtatgtagca
attctcaacattgatgaagtcgtacgtattttaaaatcctccggagataacgagactgca
ataaaagcactttgcgctaaacactgggctatagacgaagaacttgagctacttgtagaa
actatctcaaacattaagcttctgaacagagaatacaaactcagcacagcgcagtctaag
gcaatcttggaaatgaaaatgcaacgtataaccaacactgagaaaggtcaattggttgcc
gagattcatgccgaaatgaacatcgtcaaagaatgtgcttcaatactgggaaatgaggct
gttttgataaatgtaatagtgcaggaactgaatgaaataaaggcgaagtacccgcaagca
cggaagagtgttattttaaaaaatgtcaatgccgtgtatgcagaagaggaccttatcgaa
cgcgagcaagtcgttgtcacagcaacatattctgggtatataaagcgtgtccaaatctca
aattacagggttcagagaagaggaggaaagggccgtatcgcacaaaacataaaatctgag
gatcagttggcacagatttttgttctcagtacgcacgatgaaatactcttcttctccagt
aaaggtaaagtctataagttaaaggcttacaagttgcctataggcgaacctcaatcgcgt
ggaagagctttggtgaacatttttgatcttgctgatgatgaatctattacaagtattctt
cctttgaaaaattccgatgctgagaacttaatattcttgactgcccaaggaaaggtcaaa
cgcaactctatgagtgactttgcctatgtcccagcaaatggaaaggtagctatcaaactc
aacgataacgacgcgttaatatctgtcaaaactgctcagaatgaagattgtatttttatt
tctaccaaggacggaaaatgcataaggttcttggttgaagatttgagagtccttaagagt
aggagttccgaaggtgtaaaagctataactttgggaaaagatgataacgctatctccctt
tcaatactgaataagcggattctttcaccggaaaacaaagctgagtacatgaaaacgaag
ttcctcgagagaatccaaaatcccgaaaatcatgaagaacagtttgttcttacagttact
gaaaatggttatggcaaaatcacatcaagttatgaatataggataacaaaccgaggaggc
gtcgggataattaacatatcgacttctgaacgcaacggtaaggttgtctcgagcttcaag
gtaacgcttagtaaccatataatgcttgttacaaacagaggacaagtcataagaatagaa
gcaagcaacatcccggttcttgggcgtaatacacagggtgtacgcctattctcaataagg
gctgaggaaagagttgcttcggtaacagaggtagaagaggtggaagaggaagattccgaa
ataaatgaaaattgtcaaaatgatagttaa
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