Oecophyllibacter saccharovorans: E3E11_00635
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Entry
E3E11_00635 CDS
T06092
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
neh
Oecophyllibacter saccharovorans
Pathway
neh03030
DNA replication
neh03430
Mismatch repair
neh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3E11_00635 (dnaE)
03430 Mismatch repair
E3E11_00635 (dnaE)
03440 Homologous recombination
E3E11_00635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
neh03032
]
E3E11_00635 (dnaE)
03400 DNA repair and recombination proteins [BR:
neh03400
]
E3E11_00635 (dnaE)
Enzymes [BR:
neh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3E11_00635 (dnaE)
DNA replication proteins [BR:
neh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3E11_00635 (dnaE)
DNA repair and recombination proteins [BR:
neh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3E11_00635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PucR
Motif
Other DBs
NCBI-ProteinID:
QDH14612
LinkDB
All DBs
Position
complement(145771..149196)
Genome browser
AA seq
1141 aa
AA seq
DB search
MSHADFVHLRNHSAYSLSQGAMRVPDLVRLAVENAMPAVALADSGNLFGALEFSQTCRKS
GVQPIIGCQLALPSLSKKVGAPADPLVVLARNEEGLQNLRFLTTQGYLGDDPADPRVSLD
VLCEKSAGLFLLTGGNRSRLNHLLLTDQEEQAQYFLEQLKEAFGDNLAVELNRLGEAGEA
VTEERLIALADKLALPLVATNECFFAVPDMHEAHDALLCIAQGRTMAEEDRWRVSPEAWF
KPAVQMRSLFGDLPEACDNTLTIARMCAVATDTRKPLLPVCSKVREGSTEAETLRAMARE
GLEKRLAVMPDGEQKRTQYEQRLTHELDIIEGMGFPGYFLIVADFIQWTKAHDIPVGPGR
GSGAGSLVAYALTITDIDPIPFGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVRNEY
GQDRVAQIITFGKLQAKAAVRDVGRVMGLPYGLVNKVAELIPNNPAKPTPLAVAIASEPR
LQEMRDTDEAVRDLLGIALKLEGLFRHASTHAAGVVIGDRKLVELVPLYRDPRSDMLVTQ
FNMKFVEQAGLVKFDFLGLTTLTILKRGVDFLEEMGIRINLSRIPLDDPATFAMLARGDT
AGVFQFEGAGMRDMLRQMEASRLEDLIAGVSLYRPGPMAHIPEYCRRKHGAHWEAPHEEI
RPILEETYGIMVYQEQVMQIAQKMAGYSLGAADLLRRAMGKKIASEMEKQRAIFREGAMK
RGITAEKAEEVFDLMAKFADYGFNKSHAAAYALVSYQTAWLKANHPEAFLAGCMSLAREK
TDKLAALCQEADRMGIEVLPVDINRSQADFSIETLPDGRKAIRYALSAVKRVGTAAMEGL
VADRAGKAFIDLTDFAERVDAKHINKIQLESLAKAGAFDSLGLDRHTVFANAELVLRRAQ
TRAQEKEVGQAGLFGGSAGAPMREVLRLKKVQPWPDFERLSQEANVIGFHMSAHPLDAYR
KVLQRLGVKPAARLEELARQGVSKVKIAGCVVDKKERPTRTGKKMAWVGLSDPSGNCEVT
LFAETLGVCRDLLVTGQAVVVTAELKLEGDALRITVQGMIDLERAAAEDGGEIRLWVERE
EVLPQLKAVLEQVEGGRGRIYLLPAVEEERAVEIMLPARYRVTPRLSETLQVLEGLRLEE
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgcagatttcgtccacttacgcaatcattcggcctattccctgagccaggga
gccatgcgcgtccctgaccttgtccgccttgcagttgagaacgccatgccggctgttgca
ctggcagacagcggcaatctgttcggcgcgctggaattctcccagacctgccgcaaatcg
ggcgtgcagcccatcatcgggtgccagctggccctgccttcgttgagcaagaaggtcggt
gcccctgctgatccgcttgttgttctggcccgcaatgaagagggattgcagaatctgcgt
tttctgacaacgcagggctatctcggcgatgatcctgctgatccgcgcgtgtccctggac
gttctgtgtgaaaaatcggccggtctgtttctgctgaccggcggcaaccgcagtcgcctg
aaccatcttctgctgaccgatcaggaggagcaggcgcaatattttctcgagcagctgaag
gaagctttcggcgataatctggctgttgagctgaaccggttgggcgaagcgggtgaagcc
gtgacggaagagcgccttatcgccctggctgataagttggcccttcccctggtggccacg
aatgaatgcttcttcgcggtgccggacatgcacgaggctcatgacgccctgctgtgcatc
gcccagggccggaccatggccgaggaagaccggtggcgcgtttctcctgaagcctggttc
aagccagcagtacagatgcgcagcctgttcggggatctgcctgaagcctgcgacaacacc
ctgacaattgcccgcatgtgcgcggtggccaccgatacccgcaagccgcttctgcccgtg
tgttccaaggtgcgggaaggcagtacagaagctgaaaccctgcgcgccatggcccgcgaa
gggctggaaaagcggctggcggtaatgccggacggagagcagaaacgtacccaatacgag
cagcgtctgacgcatgagctcgatatcatcgaaggcatggggttcccgggctactttctg
atcgttgccgacttcattcagtggaccaaggcccatgacattccggtcgggccggggcgg
ggatcgggcgcaggctccctggtggcctatgccctgaccattaccgatattgatcccatt
cccttcgggctgctgtttgagcgtttcctgaatcccgaacgcgtctcaatgccggatttc
gatatcgatttctgccaggaccggcgtgacgaggtcatccgttacgttcgcaacgaatat
ggccaggaccgtgtggcgcagatcatcactttcggtaagctccaggccaaggcggccgtg
cgcgatgtcgggcgcgtgatgggtctgccttacggcctggtgaataaggttgccgaactt
attcccaacaatccggccaagcccacgccgcttgcagtggcgattgccagcgaacctcgc
ctgcaggagatgcgcgatacggacgaagccgtgcgcgatcttctgggcatcgcgctcaag
ctggaaggacttttccgccacgcctctacccatgcggccggcgtggtgatcggggaccgg
aagctggtcgagctcgtcccgctctaccgggacccgcgcagtgacatgctggtaactcag
ttcaacatgaaatttgtcgaacaggccgggctggtgaagttcgatttcctcggcctgacg
accctgacaattctcaagcgcggcgtcgatttcctcgaggaaatgggtatcaggatcaat
ctttcgcgtatcccgctcgatgatccggccacctttgccatgctcgcccgtggcgatacg
gcaggcgtgttccagtttgaaggggcaggcatgcgtgacatgctcaggcagatggaagcg
agccgcctggaagacctgattgccggcgtgtcgctgtatcggcccggcccgatggcgcac
attcccgaatattgccggcgcaagcacggggcgcattgggaagcacctcatgaggagatc
cgaccgatccttgaagagacctacggcatcatggtctatcaggaacaggtgatgcagatc
gctcagaaaatggcgggctacagcctgggtgccgctgatctcctgcgccgtgcgatgggc
aagaagatcgcctcggagatggaaaaacagcgcgccatcttccgggaaggcgccatgaaa
cgggggatcacggctgagaaggctgaagaggtcttcgacctcatggccaagtttgccgat
tatggtttcaacaagtcccatgcggctgcttatgcgctggtttcgtaccagacggcctgg
ctgaaagcgaatcatccggaagctttcctggcaggctgcatgtccctggcgcgtgaaaaa
accgacaaactggcagccctctgccaggaagcggaccggatgggtattgaagtgctgccg
gtggacatcaacagatcgcaggcggatttctcgattgagacccttcctgacgggcgcaag
gccatccgttatgccctttcagctgtcaagagggtcggtacagcagccatggaaggcctg
gtggctgaccgggctggaaaggcgtttattgatctgacagattttgccgaacgcgttgac
gcgaaacacatcaacaagattcagcttgaaagtctggccaaggcaggggctttcgacagc
ctgggcctggatcgccatacggtgtttgccaatgctgagctggtgctgcgccgtgcccag
acgcgggcgcaggaaaaggaagtcggacaggccgggctgtttggaggaagcgctggggcg
ccgatgcgcgaagtgctgcgtttgaagaaagtgcagccctggcctgattttgagcgcctt
tcgcaggaagcaaatgttatcggcttccacatgagtgcccatccgcttgatgcctaccgc
aaggtgctgcagcggctgggcgtgaaaccggcggcccggctggaagaacttgcccggcag
ggggtgagtaaagtcaagattgcgggttgcgtggtcgacaagaaagaacgccctacccgt
accggcaagaagatggcctgggtcggactgagtgacccgagcggcaattgtgaagtgacg
ctttttgccgaaaccctgggggtctgccgcgatctcctggtgacgggtcaggcagtcgtg
gtgacagcagagctcaagctggaaggggacgcgctcaggatcaccgttcagggcatgatc
gatctggagcgcgccgcggctgaagatggcggggagatccgtctgtgggttgagcgcgag
gaagtcctgccccagctcaaggctgtgctggagcaggtcgaagggggcaggggccggatt
tatctcctgccggcggtggaggaagaacgggctgtggaaatcatgctgccagcgcgttac
cgcgtgacgccgcgcctttctgaaaccttgcaggttctggaaggtctgcgcctggaggag
agctga
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