Oecophyllibacter saccharovorans: E3E11_01215
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Entry
E3E11_01215 CDS
T06092
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
neh
Oecophyllibacter saccharovorans
Pathway
neh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3E11_01215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
neh03019
]
E3E11_01215
Enzymes [BR:
neh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E3E11_01215
Messenger RNA biogenesis [BR:
neh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E3E11_01215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QDH14703
LinkDB
All DBs
Position
complement(280002..281288)
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AA seq
428 aa
AA seq
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MTSFTALGLAEPIQKALQDEGYETPTPIQAGAIPHLMEGRDLLGLAQTGTGKTAAFSLPI
LNELLTHPRPPKPRGMRALILAPTRELAAQIDANIAAYGRHIPGFTHAVIFGGVGQNKQV
EAMKRGVDVLVAAPGRLLDLVGQGFIDLSTPEIVVLDEADRMLDMGFIHDIKRIVAQLPA
QRQTLLFSATMPESIRDLAHSLLKDPATVQVTPESTTVERIDQSVLFVDAGNKKEALLHQ
LKKDDVQRAVVFTLMKHEANKVADYLNKHGITAAAIHGNKSQGARERAMAGFRDGSVRVL
VATDIAARGIDVDDVSHVVNYDLPNVPESYVHRIGRTARAGREGQAVSLVDAEQRAWLRD
IEKRIGQKVPVITDHPHHSEAAQNSTLPPPVLGGGGRGRGRGGRPGGQGGGGRRPSSAPR
GPRSGGRR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttttacggcgcttggtctggctgagcccatccagaaggccctgcaggacgaa
ggatatgaaacccccacgcccattcaggccggggccattccccatctgatggaagggcgc
gatctgcttggcctggcacagaccggcactggcaagaccgccgctttttccctccccatc
ctcaatgagctgctgacccatccccgtcctccgaaaccccggggcatgcgcgcgctcatc
ctggcgccgacgcgtgagctcgccgcccagattgatgccaatatcgctgcttacggccgc
catattcccggttttacccatgcggtgatcttcgggggtgtggggcagaacaagcaggtc
gaagccatgaagcgcggtgtggacgtgctggtagcagcaccaggccgtctgctggatctg
gtcggacagggcttcattgatctctccacgcctgaaatcgtggtgctggatgaagcggat
cgcatgctggacatggggttcattcacgatatcaagcgcatcgtggcccagctcccggcc
cagcggcagaccctgctgttttcagcaacgatgcctgaatcgatccgggatctggcccat
tccctgctcaaggacccggcaacggtgcaggtcacgccggaatccaccactgtggagcgt
attgaccagagcgttctctttgtggatgcgggcaacaagaaggaagccctgctgcaccag
ctgaagaaggacgacgtccagcgcgccgtggtcttcacgctgatgaagcatgaggccaac
aaggttgcggattacctcaacaagcatggcatcacagccgccgccattcacggcaacaag
tcacagggcgcgcgtgagcgggccatggccggcttccgtgacggcagtgtgcgcgttctg
gtggccactgatatcgctgcgcgcgggattgatgtggatgacgtctcgcatgtggtcaat
tacgatctgccgaacgtgccggaatcctacgtgcaccgtatcggccgcacggcgcgtgcg
gggcgcgaggggcaggccgtctccctggtggatgccgaacagcgcgcctggctgcgtgat
atcgaaaaacgcatcggccagaaggtgcctgtcatcaccgaccatccccatcattccgag
gcggcgcagaactcgaccctgccgccgccggttctggggggcggcggccgtggtcgcggt
cgtggcgggcgcccgggcgggcagggcgggggcggacgtcgcccgtccagcgcgccgcgt
ggcccgcgttccggtggtcgccgctga
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