Oecophyllibacter saccharovorans: E3E11_05605
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Entry
E3E11_05605 CDS
T06092
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
neh
Oecophyllibacter saccharovorans
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neh03400
]
E3E11_05605 (addB)
Enzymes [BR:
neh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3E11_05605 (addB)
DNA repair and recombination proteins [BR:
neh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E3E11_05605 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDH15409
LinkDB
All DBs
Position
1298324..1301476
Genome browser
AA seq
1050 aa
AA seq
DB search
MSGIATLAATEPFLDRIAQEWLQRYGARDEGGAAGGRILVPGRRAARALQEAFLRVLDGR
AALLPAITPLGDLEEETLFAMDLEARFPPAVDPTHRLVVLTQLVLKAPLARIADNSEGAL
ERAWPLAQALAQLMDEAERAGVDLAHALPTAVAEDYAEHWQETLVFLEIVTKFWPAWLQE
QGFSNPVARQVSLLRAQAEAWLQAPPEGPLWAAGFVDGSGGVAELLGAVARAPEGCVILQ
GVDLKLNEPLWESLPQAHPQALLRDLLTTLEVPRSRLEVWAQSSPPAQDSHAAREGLMRQ
VMLPEQGLFSWGRQQPHSLLAAGVEGLSLLTAEDTQQEAQVIALALRAIAEQPGRRASLV
TPDLSLARRVETELLRFGIHADNSAGEPLSGTPPAVFLRLVADAAASQLAPVALLAVLKH
PLASLGLGAGRARASARLLERQLLRGPSPPPGIAGLRQALAEREKELEKNTLKHGQDGQS
PERGEDPASWGSSADAPHTPAPLKAFLDRIEQAFAPLLALEGDASLPDLLTGLVQAAEAL
AALPEEAEEESSARPGAQLWRGDDGRLLSRHLAELMAHGEALPGQRLNGLEAFLTVSMAG
KSLTGLRGHQQGVALAHPRISILGVLEARLMAFDTVILGALTEASWPPATDPGPWLSRPM
RQRVGLPSPERRLGASAHDFLMSVLASRQVLLSAPARREGSPAVRARWLTRLQAYLSGQE
EAPALPAPAALAWQQVLDRPLHAVATPVAPPRPRPPLALRPRRLSITEIDLLKRDPYAIY
GRHILKLRPLPPLEEGVDHAHYGLVVHAALEEMFRRHPQAWPADARRELADCFERALKAQ
PLRPALVAWWRPRLERIADWVVAQELPQRLGGGVWTTAAEAKVRHVLHGLPGGSFTLTGR
ADRIDLAAMHDGAEDAPAALRAARVFDYKTGTPPRKADVALGWDSQMVLEAALLARGYFP
DLPAARAESLVYWQLQGGPVPGRVHEMPGRKSALSLDELVDGALDQLAALIGDYDNPRHA
YLSHPWAEHTARFTDYAQLARVSEWRSGSR
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtattgccacccttgcggcaacggaaccctttctggaccggatcgcccaggag
tggttgcagcgctacggcgcgcgcgatgaaggcggtgctgcaggcggacgcattctcgtg
ccgggccgccgtgcggcgcgcgcgctgcaggaagcgttcctgcgcgttctggatgggcgc
gctgccctgctgccggccatcacccctctgggagatctggaggaggaaacgctgtttgcc
atggatctggaagcacgttttccgcctgccgtggacccgacccaccgtctggtggtgctg
acacagcttgtgctgaaagcccctctggcccgaattgccgacaattccgaaggcgctctg
gagcgtgcctggcccctggcccaggcgctggcgcagctgatggatgaggccgagcgtgcc
ggcgtggacttggcccacgcgctgccgacggcggtggctgaagattacgccgagcactgg
caggagacgctggtctttcttgaaattgtcacgaaattctggcctgcctggctgcaggag
cagggattttccaaccctgttgcccggcaggtgagcctgctgcgggcgcaggctgaagcc
tggctgcaggcgccgcctgaaggccctttatgggcagcgggtttcgttgatggcagcggg
ggggtggccgagctgctgggggccgtggcgcgcgcacctgaagggtgcgtcatactccag
ggagtggatctgaaactgaacgagcctttgtgggaaagcctgccccaggcccatccccag
gcgctgctgcgcgatctgctgacaacccttgaggtcccgcgcagccgcctggaagtgtgg
gcgcagtcgtctccccctgcacaggacagccatgcagcaagggaagggctgatgcgccag
gtgatgctgcctgagcaggggctgttcagctggggccgccagcagccgcattcccttctg
gcagccggcgtggaagggttgagcctgctgacggccgaagacacccagcaggaagcgcag
gtcatcgcgctcgccctgcgtgcgattgctgagcagccgggacggcgggccagcctggtc
acgcccgatctctccctggcgcggcgcgtggagaccgagctgcttcgtttcggcattcat
gccgataattcggccggtgagcccctcagcggaacgccgccggctgttttcctgcgtctt
gtcgctgatgcggcggccagccagcttgccccggtcgccctgctggccgtgctcaagcat
cctttggcctcactgggtctgggggctggccgggcacgggccagcgcgcggctgctggag
cgccagctcctgcgaggcccgtcgcccccaccaggcatcgccggtctgcgccaggccctg
gctgagcgtgagaaagagcttgaaaaaaacacccttaagcatgggcaggatggccagtcc
cctgagaggggggaagaccccgccagctggggcagcagtgccgatgcgccccatactccc
gccccgctgaaagcctttctggacaggattgaacaggccttcgcgcccctgctggcgctg
gagggcgatgcttccctgcctgacctgctgaccggtctcgtgcaggctgccgaagcgctg
gctgcattgccggaggaagcggaagaggagagctctgcgcgcccgggcgcgcagttgtgg
cgcggggatgacgggcgccttctgtcgcgtcacctggctgagctcatggcccatggcgaa
gccctgcccggccagcggctcaacgggctggaggcctttctgaccgtttcaatggccggc
aagagcctgacagggttgcggggccatcagcagggtgtggcgctggcccatccgcgcatc
tccattctcggggtgcttgaagcgcgcctcatggcctttgatacggtcattctgggcgcc
ctgacggaagccagctggccgccggcaaccgatcccggcccatggctgagccgcccgatg
cgccagcgggtcgggctgccttcccccgagcgacggctgggggcgagcgcgcatgatttc
ctcatgtcggttctggcctcccgtcaggtgctgctctccgcccctgcccggcgggaaggc
agccctgccgtgcgtgcgcgctggctgacgcgcttgcaggcctatctctccggccaggaa
gaagcgcctgccctgcctgcgccagcagccctggcctggcagcaggttctcgaccgcccg
cttcatgcagtggcaacccctgtcgcgccgccccgtccgcggccgccgctggcgctgcgt
ccgcggcggctgagcatcacggagatcgatcttctcaagcgtgatccctatgccatctac
ggccgccatatcctgaaactgcgccccttgccgcctctggaggagggggtggaccacgcc
cattacggattggtggtgcatgcggcgctggaggagatgttccgccgccacccccaggcc
tggcccgctgacgcgcgccgggagctggcagactgtttcgagcgggccctgaaagcgcag
ccactgcgcccggccctggtggcctggtggcgcccgcgcctggagcggatcgctgactgg
gttgttgcccaggaactgccgcagcgtctgggcggtggcgtctggaccaccgctgctgaa
gcaaaggtgcgccatgtccttcacggcctgcccggcggttccttcaccctgaccggtcgg
gccgaccggattgatcttgccgccatgcatgacggagctgaagacgcgcctgctgcactg
cgtgcggcacgcgtgttcgactacaagaccggcacgccgccgcggaaggcggatgtggcc
ttgggttgggattcccagatggtgctggaagccgccctgctggcacggggatatttcccg
gacctgccggcggcgcgcgctgaaagcctggtttactggcagctgcagggcggtcctgta
cctggcagggtgcatgagatgccgggcaggaaaagcgcgctttccctcgatgagctggtt
gatggcgcgctggaccagctggctgccctgatcggtgattacgacaaccctcggcatgcc
tatctgtcgcatccctgggctgaacatacggcgcgctttaccgattacgcccagctggcg
cgcgtcagtgaatggcggagtggtagccggtga
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