Oecophyllibacter saccharovorans: E3E11_05935
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Entry
E3E11_05935 CDS
T06092
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
neh
Oecophyllibacter saccharovorans
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
neh03016
]
E3E11_05935 (truB)
Enzymes [BR:
neh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E3E11_05935 (truB)
Transfer RNA biogenesis [BR:
neh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E3E11_05935 (truB)
Prokaryotic type
E3E11_05935 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDH15462
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All DBs
Position
1378629..1379600
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AA seq
323 aa
AA seq
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MGRRRGRDLDGWLILDKPLGPTSTDMVNRFRWALDARKAGHGGTLDPLASGVLPIAFGKA
TATIPYIMDATKRYRFTLRFGESRTTDDLEGEILARSEHRPSDEAIQAVLPRLSGEVMQV
PPVYSALRVGGQRAYDLARAGRPPDLPTRPARIDSITLVSRPDRDTAVFEVQSGKGVYMR
ALARDIALACGTVGHVSVLRRLKCGPFEISQAYVPALDAEGQLKLDKMAESGDKAGVLPV
PLWPVATALDDIPALAVTREEGKRLVCGKRLETLSLLDRPVETLNDQPLWRVCLEGHVLG
LCRVDHGQVKAVRMLENHLFFGD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcaggcgcggacgtgatctcgatggctggctgatactcgataagcctctgggc
ccgacttcgacagacatggtcaaccgcttccgctgggcgcttgatgcgcgtaaggcgggg
cacggcggcacactcgacccgctggcctcaggcgtgctgcccatcgcctttggcaaggcc
actgcgaccattccctatatcatggacgccaccaagcgttaccgcttcaccctgcgcttt
ggtgaaagccggacgaccgatgaccttgaaggggaaattcttgcccgctcggaacatcgg
ccgtccgatgaggccattcaggccgtgctgccgcgcttgagcggggaggtgatgcaggta
cccccagtctactcggccctgcgcgtgggcgggcagcgggcctatgacctggcgcgggct
ggccgtcctcctgacctgcccacgcgccccgcacgcatcgattcgatcactctggtgagc
cggcccgaccgcgatacggcagtgttcgaggtgcagtcaggcaagggggtctacatgcgc
gccctggcccgcgatatcgcgctggcctgcggcacggtcggtcacgtcagtgtgctgcgg
cgcctgaaatgtgggccttttgagatctcacaggcttatgttcctgcccttgacgctgaa
ggtcagttaaagctggacaaaatggctgaaagtggagacaaggcaggggtccttccggtt
cccctctggccggtggcgaccgcgctggacgacatcccggcgctggccgtgacacgcgag
gaggggaagcgcctggtctgcggcaagcggcttgaaaccctgtcgctgctggaccggcct
gtcgaaacgctgaacgatcagcctttgtggcgggtgtgcctggaggggcacgtgctgggc
ctttgccgtgtcgatcacggtcaggtgaaggcggtgcgtatgcttgaaaaccatttgttt
tttggagattga
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