Oecophyllibacter saccharovorans: E3E11_05945
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Entry
E3E11_05945 CDS
T06092
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
neh
Oecophyllibacter saccharovorans
Pathway
neh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3E11_05945 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
neh03019
]
E3E11_05945 (pnp)
03016 Transfer RNA biogenesis [BR:
neh03016
]
E3E11_05945 (pnp)
Enzymes [BR:
neh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E3E11_05945 (pnp)
Messenger RNA biogenesis [BR:
neh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E3E11_05945 (pnp)
Transfer RNA biogenesis [BR:
neh03016
]
Prokaryotic type
tRNA degradation factors
E3E11_05945 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
BioW
DUF4410
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_RRP5
aRib
Motif
Other DBs
NCBI-ProteinID:
QDH16062
LinkDB
All DBs
Position
1380271..1382409
Genome browser
AA seq
712 aa
AA seq
DB search
MFNYYRKEIEWAGRPLILETGKVARQADGAVLVTYGGTSVLCTAVGAKSVKPGQDFFPLT
VNYQEKAYSAGKIPGGFFKREGRPSENEVLTSRLIDRPIRPLFPDNFRNEVQVTATVVSH
DMENDPDIVALIGCSAALTLSGIPFFGPVAAARVGKIDGQFVINPTLSQLPQSKLDLVVA
GTSEGVLMVESEAQELPEDQMLEAVMIGHAAYQPVIDAIIALAEVAAREPWELPEISKDE
VAMRKRVDKIGAKPMAEAYKEQKKQLRHDKVDAVRNQIVETLTEEGFDPEKAKPMIKDLE
AQVVRGAILKTGTRIDGRDLTTVRPITAEVGTLPRTHGSSLFTRGETQALVVATLGTGQD
EQIVDALEGEYRSRFMLHYNFPPYSVGEVGRMGSPGRREIGHGKLAWRALNPLLPAKESF
PYTMRVVSEITESNGSSSMATVCGTSLALMDAGVPLPRPVAGIAMGLIKEDRGHAILTDI
LGDEDHLGDMDFKVAGTSEGVTALQMDIKITSITPEIMKEALEQARDGRLHILGEMSKAL
AQGREGVSGNAPKITTMAVPKEKIRDIIGQGGKTIREIVEYSGAKVDIGEDGTVTIAATN
DDQAQKAINRIQGLVAEPEVGKIYDGKVVKTADFGAFVNFLGPKDGLVHISELAPGRVGR
TTDVVKEGDQVKVKVLGFDDRGKVKLSMRVVDQETGDDITDSVGEKTPRAPR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattactatcgcaaggagatcgagtgggccgggcgtccgctgatcctcgagacc
ggcaaggtcgcccgccaggcggatggcgctgttctggtgacctatggcggcaccagcgtg
ctgtgcaccgccgtcggcgccaagagcgtcaagcccggccaggatttcttccccctgacg
gtcaattaccaggaaaaggcctattccgccggcaagatccccggtgggttcttcaagcgc
gaaggtcgtccttctgagaacgaggtcctgacctcccggctcatcgaccgacccatccgg
ccgctttttcccgacaatttccgcaatgaagtccaggtgaccgccactgtcgtcagccac
gacatggagaacgatcccgacatcgtggcgctgatcggctgctctgctgccctgaccctt
tcgggtatccccttcttcggcccggtggctgcggcgcgcgtaggcaagattgacggccag
ttcgtcatcaacccgacgctgagccagctgccgcagagcaagcttgacctcgtggtggcc
ggtacttccgaaggcgtgctgatggttgaatccgaggcgcaggaactgcctgaagaccag
atgctggaagcggtgatgatcggccatgccgcctatcagccggttattgacgcgatcatc
gccctggcggaagtggctgcgcgcgagccgtgggagctgcctgagatctccaaggacgaa
gtcgcgatgcgcaagcgcgtcgacaagatcggcgccaagccgatggctgaagcctacaag
gagcagaagaagcagctgcgccatgacaaggtggacgcagtgcgcaaccagatcgtcgag
acgctgaccgaggaagggttcgaccccgaaaaggccaagccgatgatcaaggatcttgaa
gcgcaggtggtgcgtggcgccatcctcaagaccggcacccggatcgacggccgtgacctg
acgaccgtgcgcccgatcaccgctgaagtcggcaccctgccgcgcacgcacggctcctcg
ctgtttacgcgtggcgaaacccaggctctggttgtcgccactctggggaccgggcaggac
gagcagatcgttgacgcgcttgagggtgaataccgctcccgtttcatgctgcactacaac
ttcccgccctattccgtgggcgaagtcgggcgcatgggctcgccgggccgccgcgagatc
ggtcacggcaagctggcctggcgcgcgctcaatccgctcctgccggccaaggagagcttc
ccctacaccatgcgcgtggtgtctgagatcaccgagagcaacggctcttcctccatggcg
acggtgtgcggcacctcgcttgcgctgatggatgccggtgtgccgctgccgcgcccggtt
gcgggcattgccatggggctgatcaaggaagaccgcggtcacgccatcctgaccgacatc
ctgggtgatgaggatcacctgggcgacatggacttcaaggtggccggcacctctgaaggc
gtgactgccctgcagatggatatcaagatcacctccatcacgcctgaaatcatgaaagag
gcgctggagcaggcgcgtgacgggcgcctgcatatcctgggcgagatgtccaaggcgctg
gcgcaggggcgtgaaggcgtttccggcaatgcgccgaagatcacgaccatggccgtgccc
aaggagaagatccgtgacatcatcggccagggcggcaagacgatccgcgagatcgtcgag
tattccggcgccaaggtggatatcggcgaagacggcaccgtgacgatcgccgccacgaat
gacgaccaggcgcagaaggccatcaaccgcatccagggcctggtggctgagccggaagtg
ggcaagatctatgacggcaaggtcgtcaagacggctgacttcggcgccttcgtgaatttc
ctcggtcccaaggacgggctggtgcacatttccgagcttgcgccgggccgcgtcggccgc
accacggacgtggtgaaggaaggcgatcaggtgaaggtgaaggtgctgggcttcgatgac
cgtggcaaggtcaagctgtccatgcgcgtggtcgaccaggaaacgggcgacgacatcacg
gacagcgtcggcgaaaagacgccgcgtgcgcctcgctga
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