Oecophyllibacter saccharovorans: E3E11_06765
Help
Entry
E3E11_06765 CDS
T06092
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
neh
Oecophyllibacter saccharovorans
Pathway
neh03030
DNA replication
neh03410
Base excision repair
neh03420
Nucleotide excision repair
neh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3E11_06765 (polA)
03410 Base excision repair
E3E11_06765 (polA)
03420 Nucleotide excision repair
E3E11_06765 (polA)
03440 Homologous recombination
E3E11_06765 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
neh03032
]
E3E11_06765 (polA)
03400 DNA repair and recombination proteins [BR:
neh03400
]
E3E11_06765 (polA)
Enzymes [BR:
neh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3E11_06765 (polA)
DNA replication proteins [BR:
neh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E3E11_06765 (polA)
DNA repair and recombination proteins [BR:
neh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E3E11_06765 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3E11_06765 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QDH15605
LinkDB
All DBs
Position
1556325..1559135
Genome browser
AA seq
936 aa
AA seq
DB search
MADTQHTAPETPATNATEETTPSKLVLVDGSGFIFRAFHALPPMNTPDGTPVNAVYGFTN
MLSRLTADHPGAHVAVIFDAARQTFRNDIYPPYKAHRPPPPEDLRPQFALMREATEAYGI
PSVELEGWEADDILATYARQAVAAGQECVIITSDKDLMQLVRPGVTLLDPIKQKPIGSKE
VEAKFGVPPAQVIDVQALMGDATDNVPGVPGIGPKGAAQLVQEHGGLEAILAAAPEMKPS
KRRDNLIAHAGDARMSRKLVTLADDVPVPLPLADLRQQPLDRDAQRAWLERMGFNSLLRR
LGATGKPRRKPAEAPVEYRGPEMPQAEGTQPPYGPYATVTTSAQLEEWVASAREAGVVAI
DTETTGLDARNAELVGISLATAPGQACYIPLRHEGTLEAPAGEQLETARALELLDPLLAD
DSVLKVFQNAKYDLTVLHRAGAGPITPIDDTMLLSYVQSAGAHGQGMDELAERYLSHKPI
PYSEVTGKGRNKLLFSQVPVERATAYAGEDADVTLRLWHALRPGLVRHQATALYEGEERP
LIPILEDMEQAGIRVDAKELQRLSEDFSARMAEIEKDIHRLAGRPFNVGSPKQLGDILFG
EMNLPGGKRTRTGAWSTDSSVLDDLAEQGHELPVRIRDWRQLSKLKTTYADALLKEMDAS
QRVHTNYQMTGTITGRLSSSEPNLQNIPVRTEEGTRIRKAFVAAPGRVLLSADYSQIELR
LLAHVAKIPSLIEAFRNGEDIHARTASEVFNIPLEEMDSLTRRRAKAINFGIIYGISPFG
LARQLQVSQSEAKAYIEAYFARYPGIRDYMERMKAEAREKGYVTTPFGRRCYLPAIGERN
GARRAYAERLAINAPLQGGAADIIKRAMVQLARKLPQSGLDGQMLLQVHDELVFEVAEKD
AAALAELVKEEMESAAQLDVALAVETGTGHNWAEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacacaacacacagcccccgaaacgcctgcaaccaacgccaccgaagaaacc
accccttccaagctcgtccttgtggacggctcaggcttcatcttccgcgccttccacgct
ctgccgcccatgaacacgccggacggcacgccggtcaacgccgtctacggcttcaccaac
atgctctcgcgcctcactgccgaccaccccggcgcgcatgtggcggtgatcttcgatgcc
gcgcgccagaccttccgcaacgacatctacccgccctacaaggcccaccgtccgccgccg
cccgaagacctgcgcccccagttcgccctgatgcgcgaggccaccgaggcctacggcatc
ccctcggtcgagctcgaggggtgggaagcggacgacattctggcaacctatgcccgccag
gccgtcgcagccgggcaggaatgcgtcatcatcacgtccgacaaggacctcatgcagctg
gtccgcccgggcgtcactttgctggaccccatcaagcagaaaccgatcggctctaaggag
gtggaagccaagttcggcgtgccgcctgcgcaggtgatcgacgtgcaggcgctgatgggc
gacgccactgacaacgtgcccggcgtgcccggcatcggccccaagggcgcggcccagctg
gtgcaggaacatggcgggcttgaagccatcctggcggcagcgcctgaaatgaagccctcc
aagcgacgcgacaacctcatcgcccatgccggggatgcccgcatgtcgcgcaagctggtc
actttggccgatgacgtgcccgtgcccctgccgcttgcagacctccgccagcagccgctc
gaccgcgacgcccagcgcgcctggctggagcgcatgggcttcaactccctgctgcgccgg
ctgggggccaccggcaagccgcgccgcaagcccgctgaagcgcccgtggagtaccgcggc
cctgaaatgccccaggccgaaggcacgcagccgccctacggcccttacgccaccgtaacg
acatccgcccagcttgaagaatgggtcgcctcggcgcgcgaggcaggcgtggtggcgatc
gataccgaaaccacggggctggacgcgcgcaatgccgagctggtgggcatctcgctcgcc
accgccccgggccaggcgtgctacatccccctgcgccatgaaggcacgctcgaagcccct
gccggcgagcagctggagaccgcccgcgcattggagctcctcgaccccctgctggctgac
gacagcgtgctcaaggtgttccagaacgccaaatacgacctcaccgtgctccaccgcgcc
ggcgcgggcccgatcacgccgattgatgacacgatgctgctttcctacgtccagtccgcc
ggcgcccacggccaggggatggacgagcttgccgagcgctacctgtcccacaagcccatc
ccttacagtgaggtcacgggcaaggggcgcaacaagctgctgttttcccaggtgccggtc
gagcgcgccaccgcctacgcaggcgaagatgcagacgtgacgctgcgcctgtggcacgct
ctgcgcccaggcctcgtgcgccaccaggccaccgccctttacgaaggggaggaacgcccg
ctcattcccatccttgaggacatggagcaggccggcatccgggtggatgcgaaagagctg
caacggctttcggaagatttcagcgcccgcatggccgagattgaaaaggacatccaccgc
ctggcaggccgtcccttcaatgtcggctcgcccaagcagctgggcgatatcctgttcggc
gagatgaacctgccgggcggcaagcgcacccgcaccggggcgtggagcacggattcctca
gtgctggatgatctggccgagcagggccatgagctgccggtgcgcatccgtgactggcgg
cagctttccaagctgaaaaccacctatgccgatgccctgctcaaggagatggacgccagc
cagcgcgtgcacaccaactaccagatgaccggcaccatcaccggccgcctgtcctcaagc
gagcccaacctgcagaacatccccgtgcgcaccgaggaaggcacgcgcatccgcaaggcc
ttcgtggcagctcccggccgcgtgctgctctcggccgattacagccagatcgagctgcgc
ctgctggcccatgtggccaaaatcccctcgctgatcgaagccttccgcaacggcgaggac
atccacgcccgcaccgcgtccgaagtgttcaacatcccccttgaagagatggacagcctc
acccgccgccgggccaaggcgatcaatttcggcatcatctacggcatctcgccgtttggg
ctggcgcggcagctccaggtgtcgcaaagcgaggccaaggcctatatcgaggcctatttc
gcccgctatcccggcatccgcgactatatggagcgcatgaaggccgaggcgcgggagaaa
ggctacgtcaccacgccgttcggacgccgctgctacctgccggccatcggcgagcgcaac
ggggcccggcgcgcctatgccgagcgcctggccatcaacgcgccgctgcagggcggggcg
gcggacatcatcaagcgcgccatggtccagctggcgcgcaagctgccccagagcgggctg
gacggccagatgctcctgcaggtgcatgacgagctggttttcgaggtggccgagaaagac
gccgccgccctggccgagctggtcaaggaggaaatggaaagtgccgcccagctcgacgtg
gccctggcggtggaaaccggcaccggccacaactgggccgaagcgcattga
DBGET
integrated database retrieval system
