Oecophyllibacter saccharovorans: E3E11_08245
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Entry
E3E11_08245 CDS
T06092
Name
(GenBank) DUF3553 domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
neh
Oecophyllibacter saccharovorans
Pathway
neh03420
Nucleotide excision repair
neh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
neh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E3E11_08245
03430 Mismatch repair
E3E11_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
neh03400
]
E3E11_08245
Enzymes [BR:
neh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E3E11_08245
DNA repair and recombination proteins [BR:
neh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E3E11_08245
MMR (mismatch excision repair)
Other MMR factors
E3E11_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DUF3553
Viral_helicase1
PcrA_UvrD_tudor
AAA_22
AAA_11
AAA_16
Tudor_1_RapA
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QDH16127
LinkDB
All DBs
Position
complement(1900329..1902554)
Genome browser
AA seq
741 aa
AA seq
DB search
MVADDLFPPSPQGAYLSALNDEQRQAVETTEGPLLILAGAGTGKTRVLTTRFAHILLQGH
AWPEQILAVTFTNKAAREMRERIGTLLGKPVDSLWLGTFHSLCARMLRRHADLAGLERDF
TILDTDDQIRLLKQVMAPFRIDLKRWPAAQILNQIQTWKDRGLLPDAITPAHDEAQVANG
HARAVYTAYQNRLRELNACDFGDLMLHMVTIFRTHPDILEYYHKRFHYILVDEYQDTNTI
QYLWLRLLAKRPDNRPANIACVGDDDQSIYSWRGADIENILRFEKDFPGAHIVRLERNYR
STPRILGAAAGIIAHNEERLGKTLHAGQQALEGEPVTVINTPDSDDEARTVGGMVQRFHQ
EGQSLAEMAVLMRAGFQTRPFEESLIRLGIPYQVIGGLRFYERAEIRDGTAYMRALVQPA
DDLAFERIINTPKRGIGPKSLERLRAVGRERQLPLQATIRQMLERKELKGKAADELQRLL
DAFDRARETLATQGHVVAVEQLLEDSGYLQMWRDDTSIEAPGRLDNLRELLRAIGEFPTL
PEFLEHIALVMDSDQLQGQVDRISLMTLHAAKGLEFDTVFLPGWEEGLFPSQRSLDEGGN
RALEEERRLAYVGLTRARKRAIILHADSRRLYAGWQESLPSRFLEELPDEHVNRTRLKRP
QSSFGAPAFGRRNRLGQEMLAELKATRPPTRTGPAPELGATVRHPRFGVGVVTDIERNRL
TIEFEEAGQKHIMADFVEILP
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgatgatctctttcccccctctccccagggcgcgtatctttccgcgctcaat
gatgagcaacgccaggccgtggaaaccacggaaggaccgcttcttatcctggccggtgcc
ggcacaggcaagacgcgcgtcctgacaacacgctttgcacatattctcctgcagggccat
gcatggcctgaacagatcctggcggtcaccttcaccaacaaagcggcgcgcgaaatgcgt
gaacgcattggcacgcttctgggcaaacctgtcgattccctgtggttgggcacctttcac
tcgctttgcgcccgcatgctgcgccgtcatgctgacctggcagggctggagcgggacttc
accattctggatacggacgaccagatccggctgctcaaacaggtcatggcgcctttccgg
attgacctcaaacgctggccggcggcacagattctcaaccagatccagacctggaaagac
cgtggcctcctgcctgacgccattacgcctgcccatgatgaagcacaggttgccaacggc
catgcgcgtgcggtgtataccgcctaccagaaccggctgcgtgaactgaatgcctgtgac
ttcggcgacctcatgcttcacatggtgacgattttccgcacgcatccagatatcctggaa
tattatcacaaacggtttcactacatcctggtggacgagtaccaggataccaacaccatt
cagtatctgtggctgcgcctcctggccaagcgccctgacaaccgcccggccaatatcgcc
tgtgtcggcgatgacgatcagtccatctattcatggcgtggagcggatatcgagaacatc
ctgcgctttgagaaggattttccgggcgcgcatattgtccggctggaacgcaactaccgc
tctaccccacgtatcctgggggctgctgcaggcattatcgcccataatgaagaacgtctg
ggcaaaaccctgcatgccggtcagcaggcgcttgaaggcgagccggtgactgtcatcaac
acacctgattccgatgatgaagcccgcacggtaggtggaatggtgcagcgcttccaccag
gaggggcagtcgctggcggaaatggcagtcctgatgcgggccggtttccagacccggcct
ttcgaggagagcctgattcgcctcgggatcccctatcaggtcatcggcggcctgcgtttt
tatgagcgtgcggaaatccgcgatggcacggcctatatgcgcgcccttgtccaacccgct
gacgacctcgcctttgagcggatcatcaataccccaaagcgcggcatcggacccaaatcg
ctcgagcgcctgcgtgccgtaggccgcgagcgacagctgcccctgcaggccaccatccgc
cagatgctggagcgcaaggagctcaagggcaaggcagccgatgaactgcagcgcctgctc
gacgcctttgaccgtgcccgtgaaaccctggctacccaggggcatgtcgtggcggtggaa
cagctgctcgaagacagcggttacctgcagatgtggcgtgatgacacctcgatcgaagca
ccgggccggctggacaacctgcgcgagctgctgcgggccatcggtgagtttcccaccctg
cctgaattcctggagcacatcgccctggtgatggacagcgaccagctgcagggccaagtg
gaccgtatcagcctcatgacccttcacgccgccaaaggcctggagttcgatacggtcttc
ctgcccggctgggaagaagggcttttcccctcgcagcgctcgctcgatgaaggcggaaac
cgcgctctggaagaggaaagaaggctcgcttatgtcggcctgacccgtgcccgcaaacgt
gccattattctccatgccgacagtcggcgcctttatgcgggatggcaggaatccctgccg
agccgctttctggaggagctgcctgatgaacatgtcaatcgcacgcgcctgaaacggccc
caaagctctttcggtgcccctgccttcggtcgccggaaccggcttggccaggagatgctg
gcagaactgaaggccacccgtcctcccacccgcaccggcccagctccagaactgggcgct
acggtaagacatccccgtttcggcgtgggggttgtgacagacattgagcgcaatcgtctc
accatcgagttcgaagaggcagggcagaaacacatcatggctgatttcgtggagatcctt
ccgtga
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