Neisseria chenwenguii: BG910_00340
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Entry
BG910_00340 CDS
T05718
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nei
Neisseria chenwenguii
Pathway
nei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG910_00340 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nei03019
]
BG910_00340 (rnr)
03016 Transfer RNA biogenesis [BR:
nei03016
]
BG910_00340 (rnr)
Enzymes [BR:
nei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BG910_00340 (rnr)
Messenger RNA biogenesis [BR:
nei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BG910_00340 (rnr)
Transfer RNA biogenesis [BR:
nei03016
]
Prokaryotic type
tRNA degradation factors
BG910_00340 (rnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
OB_Dis3
TetR_C_45
Motif
Other DBs
NCBI-ProteinID:
ASK26400
UniProt:
A0A220RYW7
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All DBs
Position
complement(69852..72257)
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AA seq
801 aa
AA seq
DB search
MNKKIKSLNLREKDPFLAREKQRYAHPLPSREWVIELLEKKGVPQKIETLARELSITDDE
YEFFERRLKAMARDGQVLINRRGAVCVAEKLALVKCRVEAHKDGFGFAVPLEASSGGDFV
LYEHQMRGVMHGDIVTVRPAGIDRRGRREGTVLDIVERRQSKVVGRFYIERGVAILEAED
KRLVQSIVLEPESVAEFKPESGQVVVAEIDTYPEHHRPAVARITEVLGNYADSGMEIEIA
VRKHHLPHRFSEACTAAAKKIPAAVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVYAEK
QGRNYRLVVAIADVSHYVRPNDAIDIDALERSTSVYFPRRVIPMLPENLSNGICSLNPDV
ERLCMVCDMIVTYAGNVKEYKFYPAVMRSHARLTYNQVWAWLSDGADNPHKTQLETLYKL
FKVLQKKRFRRGAVEFESVETQMLFDDNGKIKKIVPVVRNDAHKLIEECMLAANVCAADF
LLKNKHPALFRNHLGPTPEKLATLREQLGLLGLNLGGGDNPTPKDYAGLAAQFTGRPDAE
LLQVMLLRSMQQAVYQPANEGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLQGKKYTS
EKSWQALGVHTSFCERRADDAGRDVENWLKTYYMRDKVGEVFSGKISGMTTFGIFVTLDD
IHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVTVKVTRADLDTSKIDLTLI
SGGKAGRKRRKNKAEKVAETVPEKSVRGKKAAVKQKAVKAKTAKAKPKAQQAAKKTARGK
SVKIKVKTKNAPHKGRNKAKA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaaattaaatcactaaatttacgagaaaaagatccgtttcttgcacgggag
aagcagcgttacgcccatccgctgcccagccgcgaatgggttatcgagcttttggaaaag
aaaggcgtgccgcagaaaatcgaaacactggcacgggaattgtcgattacggatgacgaa
tacgaatttttcgaacgccgtctgaaagcgatggcacgtgacggtcaggttttgatcaac
cggcgcggtgcggtttgtgtggcggaaaagctggcgctggtgaaatgccgtgtggaggcg
cacaaagacggtttcggttttgccgtgccgctggaggcgtcttcgggcggtgattttgtt
ttgtacgaacaccagatgcgcggcgtgatgcacggcgatatcgtaaccgtgcgccctgcg
ggtatcgaccgtcgcggccgccgcgaaggcacggttttggatattgtcgaacgcaggcag
tcgaaagtggtcggccgtttctatatcgaacgcggcgtggcgattttggaagcggaagac
aaacgcttggtgcaaagcattgttttagaaccggaaagcgtggctgaattcaagccagaa
tccggtcaggtcgtggtggcggaaatcgacacttatcccgagcaccaccgccccgccgtg
gcgcggattaccgaggtgttgggcaattacgccgacagcggtatggaaatcgaaatcgcc
gtgcgcaaacaccatctgccgcaccggttcagcgaagcctgtaccgcggcggcgaaaaaa
attccggctgccgtacgcaaaagcgatttgaaaggccgcgtggatctgcgcgacttgccg
ctggtgacgatagacggcgaaacggcgcgcgatttcgacgacgcggtttacgcggaaaaa
cagggacgcaattaccggctggtggtggcgattgccgacgtgagccattatgttcgcccg
aacgatgcgatcgatattgatgcgctggaacgcagtaccagtgtgtattttccgcgccgc
gtgattccgatgctgccggaaaatctttccaacggcatctgttcgctcaatcccgatgtg
gaacggctgtgtatggtgtgcgacatgattgtcacctacgctggcaatgtgaaggaatac
aagttttaccccgcagtgatgcgctcgcacgcgcggctgacttacaatcaggtttgggca
tggctttcagacggcgctgacaatccgcacaaaacccagcttgaaactttgtacaaatta
ttcaaagtattgcagaaaaaacgctttcggcgcggtgcggtcgaatttgaaagcgtggaa
acgcagatgctgtttgacgacaacggcaaaatcaaaaaaatcgtccccgtcgtgcgcaac
gacgcgcataagctgattgaagaatgtatgctggcggcgaacgtctgcgcggcggatttt
ctgttgaaaaacaaacatcccgcgctgttccgcaaccacttggggccgacgcccgaaaag
ctggcgaccctgcgcgaacagctcggccttttgggactaaacctcggcggcggcgacaac
cccacgccgaaagactacgccgggctggcggcacaatttaccggccgccccgatgccgag
ctgcttcaagtcatgctgctgcgttccatgcagcaggccgtttaccagccggccaacgaa
ggccacttcgggctggcttacgaagcctacgcccacttcacctcgcccatccgccgctat
cccgatctgacggtacaccgcgcgattaaagccgtgttgcagggcaaaaaatacacgtcc
gaaaaaagctggcaggcattgggcgtacacacgtccttctgcgagcgccgtgccgacgac
gccggccgtgacgtggaaaactggctgaaaacctactatatgcgcgacaaagtgggcgag
gtgttcagcggaaaaatttccggcatgaccactttcggcatcttcgtcaccctggacgac
atccacatcgacggcttggtgcacatcagcgatttgggcgaagactacttcaatttccgc
cccgaaatcatggcgatagaaggcgaacgcagcggcatacgcttcaacatgggcgaccgt
gtgaccgtcaaagttacccgtgccgatttggataccagcaaaatcgacctgaccctgatc
agcggcggtaaagcaggcagaaaacgccgtaaaaacaaggcagaaaaagttgccgaaacc
gtgcccgaaaaatcagtacgcggcaaaaaagcggctgtaaaacaaaaagccgtcaaggca
aaaacggcaaaagccaagcccaaagcccaacaagccgccaagaaaaccgcccgcggcaag
agtgtgaaaatcaaagtgaaaacgaaaaacgcaccgcataaaggccgtaacaaggccaaa
gcgtaa
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